RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 EPDR1Q9UM22 224 aa5.7□□□□□ -1.5
COL28A1-202ENST00000430711 PPIAL4EA0A075B759 164 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 IGHV1-24A0A0C4DH33 117 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 E7EQL1 145 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 PPIAL4DF5H284 164 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 M0R2Z0 102 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 PPIAL4FP0DN26 164 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 COX7A1P24310 79 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 CA7P43166 264 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 ERHP84090 104 aaKnown RBP5.69□□□□□ -1.5
COL28A1-202ENST00000430711 CDSNQ15517 529 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 WDR73Q6P4I2 378 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 OR4B1Q8NGF8 309 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 OR4C13Q8NGP0 309 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 RNASE8Q8TDE3 154 aaKnown RBP5.69□□□□□ -1.5
COL28A1-202ENST00000430711 Q9H3A6 140 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 ZNF331Q9NQX6 463 aaPredicted RBP5.69□□□□□ -1.5
COL28A1-202ENST00000430711 LAMTOR2Q9Y2Q5 125 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 ARL2-SNX15V9GYD0 113 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 AKAP6Q13023 2319 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 IGHV3OR16-8A0A075B7F1 116 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 C19orf71A6NCJ1 209 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 M0R3E3 92 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 NCR2O95944 276 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 APOHP02749 345 aaPredicted RBP5.69□□□□□ -1.5
COL28A1-202ENST00000430711 MT-ND6P03923 174 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 CRYGCP07315 174 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 CSN3P07498 182 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 IGHV1-8P0DP01 117 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 PSG1P11464 419 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 LOXL1Q08397 574 aaPredicted RBP5.69□□□□□ -1.5
COL28A1-202ENST00000430711 TMEM155Q4W5P6 130 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 DOPEY1Q5JWR5 2465 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 OR8B3Q8NGG8 313 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 GRAMD2BQ96HH9 432 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 TXN2Q99757 166 aa5.69□□□□□ -1.5
COL28A1-202ENST00000430711 MRPL32Q9BYC8 188 aaKnown RBP5.69□□□□□ -1.5
COL28A1-202ENST00000430711 WNK2Q9Y3S1 2297 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 SHISA9B4DS77 424 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 SNAI2O43623 268 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 HSBP1O75506 76 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 CRYGBP07316 175 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 NBEAP1P0C6P0 100 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 FOSL1P15407 271 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 CRIP1P50238 77 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 HNRNPA3P51991 378 aaKnown RBP5.68□□□□□ -1.5
COL28A1-202ENST00000430711 LYZP61626 148 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 GOLT1AQ6ZVE7 132 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 FAM231DQ6ZW35 169 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 PDPNQ86YL7 162 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 FAM57AQ8TBR7 257 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 WIPF2Q8TF74 440 aaPredicted RBP5.68□□□□□ -1.5
COL28A1-202ENST00000430711 PRSS22Q9GZN4 317 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 GAL3ST2Q9H3Q3 398 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 ZNF835Q9Y2P0 537 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 WASHC3Q9Y3C0 194 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 ANKHD1Q8IWZ3 2542 aaKnown RBP5.68□□□□□ -1.5
COL28A1-202ENST00000430711 TEX15Q9BXT5 2789 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 NKX6-3A6NJ46 265 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 OR2J3O76001 311 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 LTAP01374 205 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 TCRAP04437 139 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 KLRD1Q13241 179 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 IGFL4Q6B9Z1 124 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 Q86TA4 180 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 NUP37Q8NFH4 326 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 CACNG8Q8WXS5 425 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 ABHD17AQ96GS6 310 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 C8orf49Q96NF6 230 aa5.68□□□□□ -1.5
COL28A1-202ENST00000430711 PTPRQQ9UMZ3 2332 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 LOC105371242A0A075B767 164 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 A6NJY4 79 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 IGKV1-17P01599 117 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 IGHV3-23P01764 117 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 ARMS2P0C7Q2 107 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 UBE2G1P62253 170 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 KLF5Q13887 457 aaPredicted RBP5.67□□□□□ -1.5
COL28A1-202ENST00000430711 IGFL3Q6UXB1 125 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 PRNTQ86SH4 94 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 RNASE6Q93091 150 aaKnown RBP5.67□□□□□ -1.5
COL28A1-202ENST00000430711 RPP21Q9H633 154 aaKnown RBP5.67□□□□□ -1.5
COL28A1-202ENST00000430711 UQCR10Q9UDW1 63 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 SIGLEC9Q9Y336 463 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 KLF12Q9Y4X4 402 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 UTP20O75691 2785 aaKnown RBP5.67□□□□□ -1.5
COL28A1-202ENST00000430711 COL6A6A6NMZ7 2263 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 CFAP46Q8IYW2 2715 aa5.67□□□□□ -1.5
COL28A1-202ENST00000430711 IGHV2-26A0A0B4J1V2 119 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 C16orf97H3BN30 126 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 NDUFB3O43676 98 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 GAS8-AS1O95177 125 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 IGLV1-47P01700 117 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 IGLC1P0CG04 106 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 TNFSF4P23510 183 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 TMEM108Q6UXF1 575 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 ZNF596Q8TC21 504 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 BORCS7Q96B45 105 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 GPR82Q96P67 336 aa5.66□□□□□ -1.5
COL28A1-202ENST00000430711 MRPL27Q9P0M9 148 aaKnown RBP5.66□□□□□ -1.5
COL28A1-202ENST00000430711 ZFP30Q9Y2G7 519 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms