RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 INSP01308 110 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 HTN3P15516 51 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 ORM2P19652 201 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 FAM3BP58499 235 aaPredicted RBP10.56□□□□□ -0.72
MSH5-208ENST00000429846 UBE2MP61081 183 aaKnown RBP10.56□□□□□ -0.72
MSH5-208ENST00000429846 SPANXN5Q5MJ07 72 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 ACOT7LQ6ZUV0 252 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 TMEM144Q7Z5S9 345 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 C17orf77Q96MU5 243 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 STRAPQ9Y3F4 350 aaKnown RBP10.56□□□□□ -0.72
MSH5-208ENST00000429846 IGLV2-18A0A075B6J9 118 aa10.55□□□□□ -0.72
MSH5-208ENST00000429846 H3BRN7 92 aa10.55□□□□□ -0.72
MSH5-208ENST00000429846 RPL7P18124 248 aaKnown RBP10.55□□□□□ -0.72
MSH5-208ENST00000429846 TSPOP30536 169 aa10.55□□□□□ -0.72
MSH5-208ENST00000429846 CNN1P51911 297 aaKnown RBP10.55□□□□□ -0.72
MSH5-208ENST00000429846 TMEM88Q6PEY1 159 aa10.55□□□□□ -0.72
MSH5-208ENST00000429846 OR11H7Q8NGC8 314 aa10.55□□□□□ -0.72
MSH5-208ENST00000429846 V9GYH0 126 aa10.55□□□□□ -0.72
MSH5-208ENST00000429846 H3BP45 60 aa10.54□□□□□ -0.72
MSH5-208ENST00000429846 HOXB5P09067 269 aa10.54□□□□□ -0.72
MSH5-208ENST00000429846 GATA2P23769 480 aaPredicted RBP10.54□□□□□ -0.72
MSH5-208ENST00000429846 S100A5P33763 92 aa10.54□□□□□ -0.72
MSH5-208ENST00000429846 RAP2BP61225 183 aa10.54□□□□□ -0.72
MSH5-208ENST00000429846 SPINK13Q1W4C9 94 aa10.54□□□□□ -0.72
MSH5-208ENST00000429846 GSG1LQ6UXU4 331 aa10.54□□□□□ -0.72
MSH5-208ENST00000429846 S100A7AQ86SG5 101 aa10.54□□□□□ -0.72
MSH5-208ENST00000429846 SLC25A39Q9BZJ4 359 aaPredicted RBP10.54□□□□□ -0.72
MSH5-208ENST00000429846 PLA2G2EQ9NZK7 142 aa10.54□□□□□ -0.72
MSH5-208ENST00000429846 FAT2Q9NYQ8 4349 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 M0R2Z0 102 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 CRXO43186 299 aaPredicted RBP10.53□□□□□ -0.72
MSH5-208ENST00000429846 IL5P05113 134 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 PLP1P60201 277 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 SELENOTP62341 195 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 ID3Q02535 119 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 TMEM182Q6ZP80 229 aaPredicted RBP10.53□□□□□ -0.72
MSH5-208ENST00000429846 CYP2G1PQ6ZSU1 146 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 RNF24Q9Y225 148 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 HIGD1AQ9Y241 93 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 MUC4Q99102 2169 aa10.53□□□□□ -0.72
MSH5-208ENST00000429846 PKHD1P08F94 4074 aa10.52□□□□□ -0.72
MSH5-208ENST00000429846 TRAV8-2A0A0B4J237 113 aa10.52□□□□□ -0.73
MSH5-208ENST00000429846 SMCO3A2RU48 225 aa10.52□□□□□ -0.73
MSH5-208ENST00000429846 BOLA2-SMG1P6H3BVE0 249 aa10.52□□□□□ -0.73
MSH5-208ENST00000429846 FGL1Q08830 312 aa10.52□□□□□ -0.73
MSH5-208ENST00000429846 TMEM256Q8N2U0 113 aa10.52□□□□□ -0.73
MSH5-208ENST00000429846 ZNF738Q8NE65 137 aa10.52□□□□□ -0.73
MSH5-208ENST00000429846 DNAH2Q9P225 4427 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 A0A087X0K7 114 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 ZNF705GA8MUZ8 300 aaPredicted RBP10.51□□□□□ -0.73
MSH5-208ENST00000429846 FNDC10F2Z333 226 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 HYPMO75409 117 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 LINC00869P0C866 280 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 C1orf134Q5TEV5 83 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 CCDC190Q86UF4 302 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 BAP18Q8IXM2 172 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 RNF182Q8N6D2 247 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 PSENENQ9NZ42 101 aa10.51□□□□□ -0.73
MSH5-208ENST00000429846 DNAH17Q9UFH2 4485 aa10.5□□□□□ -0.73
MSH5-208ENST00000429846 C9orf170A2RU37 121 aa10.5□□□□□ -0.73
MSH5-208ENST00000429846 ADAP1O75689 374 aa10.5□□□□□ -0.73
MSH5-208ENST00000429846 CXCL3P19876 107 aa10.5□□□□□ -0.73
MSH5-208ENST00000429846 POLR2GP62487 172 aaKnown RBP eCLIP10.5□□□□□ -0.73
MSH5-208ENST00000429846 DLK1P80370 383 aa10.5□□□□□ -0.73
MSH5-208ENST00000429846 ATG101Q9BSB4 218 aa10.5□□□□□ -0.73
MSH5-208ENST00000429846 NAP1L6A6NFF2 107 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 PMS2P5A8MQ11 134 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 K7EPK0 472 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 SSSCA1O60232 199 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 OR5G3P0C626 314 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 CXCL2P19875 107 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 HIST1H1AQ02539 215 aaPredicted RBP10.49□□□□□ -0.73
MSH5-208ENST00000429846 SPANXN2Q5MJ10 180 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 IGFL4Q6B9Z1 124 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 OR8A1Q8NGG7 326 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 SMIM8Q96KF7 97 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 NPVFQ9HCQ7 196 aa10.49□□□□□ -0.73
MSH5-208ENST00000429846 TRAV12-2A0A075B6T6 113 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 PLAC8L1A1L4L8 177 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 NDUFB6O95139 128 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 ATP5G1P05496 136 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 ATP5G3P48201 142 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 TAS2R60P59551 318 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 RHOBP62745 196 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 PSG3Q16557 428 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 PXDC1Q5TGL8 231 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 TEPPQ6URK8 271 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 TMEM14EPQ6UXP3 125 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 OR10P1Q8NGE3 313 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 LRRC20Q8TCA0 184 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 C16orf74Q96GX8 76 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 UHRF2Q96PU4 802 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 PPP1R14DQ9NXH3 145 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 MGAT4CQ9UBM8 478 aa10.48□□□□□ -0.73
MSH5-208ENST00000429846 F5H768 121 aa10.47□□□□□ -0.73
MSH5-208ENST00000429846 TSC22D2O75157 780 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms