RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 MLST8Q9BVC4 326 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 CACNA1EQ15878 2313 aa7.12□□□□□ -1.27
CDC42BPA-206ENST00000429440 TRBV7-3A0A075B6L6 115 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 IGHV1OR21-1A0A087WYE8 117 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 C19orf71A6NCJ1 209 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 C8orf88P0DMB2 117 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 SCGB1C2P0DMR2 95 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 PSMB2P49721 201 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 RSPO4Q2I0M5 234 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 SPINK9Q5DT21 86 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 ASPHD1Q5U4P2 390 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 ZNF474Q6S9Z5 364 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 TDHQ8IZJ6 230 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 BAALCQ8WXS3 180 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 ZNF488Q96MN9 340 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 DKK2Q9UBU2 259 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 AGRNO00468 2067 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 TRAV24A0A0B4J272 114 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 MYMXA0A1B0GTQ4 84 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 TMEM150CB9EJG8 249 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 DLL1O00548 723 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 HSPB6O14558 160 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 GFRA3O60609 400 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 NDUFA7O95182 113 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 P01737 135 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 ACP1P24666 158 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 TNFAIP6P98066 277 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 PAX8Q06710 450 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 TMEM219Q86XT9 240 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 MKXQ8IYA7 352 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 ANKRD29Q8N6D5 301 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 ZNF441Q8N8Z8 693 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 HIST1H4GQ99525 98 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 PROCRQ9UNN8 238 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 USF3Q68DE3 2245 aa7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 DIDO1Q9BTC0 2240 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-206ENST00000429440 WI2-2373I1.2A0A1W2PRP0 233 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 M0R2P5 195 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 IFI27P40305 119 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 BRWD1-AS2P59051 145 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 Q6ZQT7 251 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 SLC25A48Q6ZT89 311 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 SLC25A45Q8N413 288 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 KIR2DL5BQ8NHK3 375 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 OBP2BQ9NPH6 170 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 ESPL1Q14674 2120 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 TANC2Q9HCD6 1990 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 TRAV8-2A0A0B4J237 113 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 H3BML4 177 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 K7EMI3 77 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 SYNGR3O43761 229 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 CRYGBP07316 175 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 SLC25A53Q5H9E4 307 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 FAM27BQ5VT28 67 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 MBNL2Q5VZF2 373 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 PDPNQ86YL7 162 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 HS3ST6Q96QI5 342 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 ZNF407Q9C0G0 2248 aa7.1□□□□□ -1.27
CDC42BPA-206ENST00000429440 C17orf98A8MV24 154 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 LOXL1Q08397 574 aaPredicted RBP7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 RIGQ13278 110 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 HES1Q14469 280 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 ZNF329Q86UD4 541 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 TTTY13Q9BZ97 58 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 FZR1Q9UM11 496 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 TRIOBPQ9H2D6 2365 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 A0A1B0GUT8 65 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 NPYP01303 97 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 IGKCP01834 107 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 IGFBP4P22692 258 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 EMP1P54849 157 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 RFESDQ8TAC1 157 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 PRRG4Q9BZD6 226 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 OR2H1Q9GZK4 316 aa7.09□□□□□ -1.27
CDC42BPA-206ENST00000429440 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 TRGV8A0A0C4DH27 118 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 LINC01548A6NM66 108 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 EFNA2O43921 213 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 DUTP33316 252 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 C16orf47Q6ZP98 133 aaPredicted RBP7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 C15orf53Q8NAA6 179 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 PIMREGQ9BSJ6 248 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 U3KQK5 164 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 WDFY4Q6ZS81 3184 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 PI4KAP42356 2102 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 OR2H2O95918 312 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 CA6P23280 308 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 COL8A2P25067 703 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 HERVK_113P63121 156 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 UBE2L3P68036 154 aaKnown RBP7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 OR11H6Q8NGC7 330 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 FAM167A-AS1Q96KT0 104 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 LINC01600Q96MT4 127 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 ODF3Q96PU9 254 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 TRGV9Q99603 122 aa7.08□□□□□ -1.28
CDC42BPA-206ENST00000429440 IGHV3-20A0A0C4DH32 117 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 OVOL3O00110 214 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
CDC42BPA-206ENST00000429440 C3orf22Q8N5N4 141 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms