RNA–Protein interactions for RNA: ENST00000428835.5

HLA-DPB1-212, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-212ENST00000428835 PRR20DP86480 221 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 PRR20BP86481 221 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 PRR20AP86496 221 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 OPCMLQ14982 345 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 C10orf113Q5VZT2 155 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 LINC00305Q7Z4B0 112 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 ATP5SQ99766 215 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 DNAJC4Q9NNZ3 241 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 RNF24Q9Y225 148 aa14.97□□□□□ -0.01
HLA-DPB1-212ENST00000428835 RPL7P18124 248 aaKnown RBP14.96□□□□□ -0.01
HLA-DPB1-212ENST00000428835 OR1L4Q8NGR5 311 aa14.96□□□□□ -0.01
HLA-DPB1-212ENST00000428835 TMEM37Q8WXS4 190 aa14.96□□□□□ -0.01
HLA-DPB1-212ENST00000428835 NPCDR1Q9BY65 106 aa14.96□□□□□ -0.01
HLA-DPB1-212ENST00000428835 SMIM3Q9BZL3 60 aa14.96□□□□□ -0.01
HLA-DPB1-212ENST00000428835 SLC39A9Q9NUM3 307 aa14.96□□□□□ -0.01
HLA-DPB1-212ENST00000428835 PXMP4Q9Y6I8 212 aa14.96□□□□□ -0.01
HLA-DPB1-212ENST00000428835 COL7A1Q02388 2944 aa14.96□□□□□ -0.02
HLA-DPB1-212ENST00000428835 ATF4P18848 351 aaPredicted RBP14.95□□□□□ -0.02
HLA-DPB1-212ENST00000428835 MEOX2P50222 304 aa14.95□□□□□ -0.02
HLA-DPB1-212ENST00000428835 STHQ8IWL8 128 aa14.95□□□□□ -0.02
HLA-DPB1-212ENST00000428835 ZNF709Q8N972 641 aa14.95□□□□□ -0.02
HLA-DPB1-212ENST00000428835 LINC00052Q96N35 136 aa14.95□□□□□ -0.02
HLA-DPB1-212ENST00000428835 WDR61Q9GZS3 305 aaKnown RBP14.95□□□□□ -0.02
HLA-DPB1-212ENST00000428835 RETNQ9HD89 108 aa14.95□□□□□ -0.02
HLA-DPB1-212ENST00000428835 KIR2DL5BA0A0G2JN68 375 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 KIR2DL5BA0A0G2JPC4 375 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 KNCNA6PVL3 124 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 IFNA5P01569 189 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 Q5BKY6 102 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 SAMD13Q5VXD3 122 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 KIR2DL5AQ8N109 375 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 KIR2DL5BQ8NHK3 375 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 C16orf92Q96LL3 132 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 PFDN5Q99471 154 aa14.94□□□□□ -0.02
HLA-DPB1-212ENST00000428835 UBE2CO00762 179 aa14.93□□□□□ -0.02
HLA-DPB1-212ENST00000428835 PSMB3P49720 205 aa14.93□□□□□ -0.02
HLA-DPB1-212ENST00000428835 ACTL10Q5JWF8 245 aa14.93□□□□□ -0.02
HLA-DPB1-212ENST00000428835 OR2T35Q8NGX2 323 aa14.93□□□□□ -0.02
HLA-DPB1-212ENST00000428835 SCGB1C1Q8TD33 95 aa14.93□□□□□ -0.02
HLA-DPB1-212ENST00000428835 CSTL1Q9H114 145 aa14.93□□□□□ -0.02
HLA-DPB1-212ENST00000428835 C17orf112F2Z3M2 114 aa14.92□□□□□ -0.02
HLA-DPB1-212ENST00000428835 ISLRO14498 428 aa14.92□□□□□ -0.02
HLA-DPB1-212ENST00000428835 SOCS3O14543 225 aa14.92□□□□□ -0.02
HLA-DPB1-212ENST00000428835 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.92□□□□□ -0.02
HLA-DPB1-212ENST00000428835 C17orf77Q96MU5 243 aa14.92□□□□□ -0.02
HLA-DPB1-212ENST00000428835 KCNIP2Q9NS61 270 aa14.92□□□□□ -0.02
HLA-DPB1-212ENST00000428835 GATAD1Q8WUU5 269 aa14.91□□□□□ -0.02
HLA-DPB1-212ENST00000428835 MORN5Q5VZ52 161 aa14.9□□□□□ -0.02
HLA-DPB1-212ENST00000428835 Q6ZWC4 215 aa14.9□□□□□ -0.02
HLA-DPB1-212ENST00000428835 BPIFA4PQ86YQ2 179 aa14.9□□□□□ -0.02
HLA-DPB1-212ENST00000428835 INO80EQ8NBZ0 244 aaPredicted RBP14.9□□□□□ -0.02
HLA-DPB1-212ENST00000428835 AQP10Q96PS8 301 aa14.9□□□□□ -0.02
HLA-DPB1-212ENST00000428835 WFDC1Q9HC57 220 aa14.9□□□□□ -0.02
HLA-DPB1-212ENST00000428835 FXYD6-FXYD2A0A087WZ82 144 aa14.89□□□□□ -0.03
HLA-DPB1-212ENST00000428835 TRPT1Q86TN4 253 aaKnown RBP14.89□□□□□ -0.03
HLA-DPB1-212ENST00000428835 LRRC20Q8TCA0 184 aa14.89□□□□□ -0.03
HLA-DPB1-212ENST00000428835 WWC2-AS2Q96NR7 200 aa14.89□□□□□ -0.03
HLA-DPB1-212ENST00000428835 OVOL2Q9BRP0 275 aa14.89□□□□□ -0.03
HLA-DPB1-212ENST00000428835 A0A087X0K7 114 aa14.88□□□□□ -0.03
HLA-DPB1-212ENST00000428835 TRAV5A0A0B4J249 113 aa14.88□□□□□ -0.03
HLA-DPB1-212ENST00000428835 MRPS12O15235 138 aaKnown RBP14.88□□□□□ -0.03
HLA-DPB1-212ENST00000428835 DEFB135Q30KP9 77 aa14.88□□□□□ -0.03
HLA-DPB1-212ENST00000428835 GCSAMLQ5JQS6 135 aa14.88□□□□□ -0.03
HLA-DPB1-212ENST00000428835 NBEAL2Q6ZNJ1 2754 aa14.87□□□□□ -0.03
HLA-DPB1-212ENST00000428835 SPRY2O43597 315 aa14.87□□□□□ -0.03
HLA-DPB1-212ENST00000428835 CA1P00915 261 aaPredicted RBP14.87□□□□□ -0.03
HLA-DPB1-212ENST00000428835 SNRPCP09234 159 aaKnown RBP14.87□□□□□ -0.03
HLA-DPB1-212ENST00000428835 IGFL4Q6B9Z1 124 aa14.87□□□□□ -0.03
HLA-DPB1-212ENST00000428835 C20orf173Q96LM9 149 aa14.87□□□□□ -0.03
HLA-DPB1-212ENST00000428835 PARD6GQ9BYG4 376 aaPredicted RBP14.87□□□□□ -0.03
HLA-DPB1-212ENST00000428835 RPRMQ9NS64 109 aa14.87□□□□□ -0.03
HLA-DPB1-212ENST00000428835 H3BMM0 161 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 HLA-DRB4P13762 266 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 DEFB1P60022 68 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 FAM78BQ5VT40 261 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 EBLN2Q6P2I7 272 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 MORN3Q6PF18 240 aaPredicted RBP14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 FOXI2Q6ZQN5 318 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 RNF183Q96D59 192 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 SAV1Q9H4B6 383 aaPredicted RBP14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 TP53TG1Q9Y2A0 90 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 HLA-DRB4X5D2U9 266 aa14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 HUWE1Q7Z6Z7 4374 aaKnown RBP14.86□□□□□ -0.03
HLA-DPB1-212ENST00000428835 TRAV8-2A0A0B4J237 113 aa14.85□□□□□ -0.03
HLA-DPB1-212ENST00000428835 SPP1P10451 314 aa14.85□□□□□ -0.03
HLA-DPB1-212ENST00000428835 ZNF266Q14584 549 aa14.85□□□□□ -0.03
HLA-DPB1-212ENST00000428835 FFAR4Q5NUL3 377 aa14.85□□□□□ -0.03
HLA-DPB1-212ENST00000428835 GDF5OSQ5U4N7 250 aa14.85□□□□□ -0.03
HLA-DPB1-212ENST00000428835 RNF182Q8N6D2 247 aa14.85□□□□□ -0.03
HLA-DPB1-212ENST00000428835 TNFSF18Q9UNG2 199 aa14.85□□□□□ -0.03
HLA-DPB1-212ENST00000428835 SPATA31B1PQ5VZV4 182 aa14.84□□□□□ -0.03
HLA-DPB1-212ENST00000428835 LCN15Q6UWW0 184 aa14.84□□□□□ -0.03
HLA-DPB1-212ENST00000428835 HRH4Q9H3N8 390 aa14.84□□□□□ -0.03
HLA-DPB1-212ENST00000428835 AGRNO00468 2067 aa14.84□□□□□ -0.03
HLA-DPB1-212ENST00000428835 RNF222A6NCQ9 220 aa14.83□□□□□ -0.04
HLA-DPB1-212ENST00000428835 F6UB75 175 aa14.83□□□□□ -0.04
HLA-DPB1-212ENST00000428835 G3V3Q6 166 aa14.83□□□□□ -0.04
HLA-DPB1-212ENST00000428835 SMLR1H3BR10 107 aa14.83□□□□□ -0.04
HLA-DPB1-212ENST00000428835 H3BTX0 84 aa14.83□□□□□ -0.04
HLA-DPB1-212ENST00000428835 IGKV3-20P01619 116 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms