RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 H0YIZ8 118 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 NDUFS7O75251 213 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 IGKV1D-17A0A075B6S4 117 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 LINC00473A8K010 186 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 H0YJW9 148 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 ATP6V0E1O15342 81 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 DEFB136Q30KP8 78 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 LYZL1Q6UWQ5 148 aa10.73□□□□□ -0.69
SPG11-202ENST00000427534 PEF1Q9UBV8 284 aaKnown RBP10.73□□□□□ -0.69
SPG11-202ENST00000427534 A0A0J9YY99 117 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 D6R8Y8 96 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 PHF3Q92576 2039 aaKnown RBP10.72□□□□□ -0.69
SPG11-202ENST00000427534 SH2D1AO60880 128 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 DAD1P61803 113 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 RNF114Q9Y508 228 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 DOCK9Q9BZ29 2069 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 IGKV1-16P04430 117 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 HS3ST6Q96QI5 342 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
SPG11-202ENST00000427534 DDTP30046 118 aa10.71□□□□□ -0.69
SPG11-202ENST00000427534 MGST2Q99735 147 aa10.71□□□□□ -0.69
SPG11-202ENST00000427534 C6orf226Q5I0X4 101 aa10.71□□□□□ -0.69
SPG11-202ENST00000427534 LINC00518Q8N0U6 118 aa10.71□□□□□ -0.69
SPG11-202ENST00000427534 SPXQ9BT56 116 aa10.71□□□□□ -0.69
SPG11-202ENST00000427534 C5orf64Q2M2E5 130 aa10.71□□□□□ -0.69
SPG11-202ENST00000427534 K7EM74 188 aa10.71□□□□□ -0.7
SPG11-202ENST00000427534 ID3Q02535 119 aa10.71□□□□□ -0.7
SPG11-202ENST00000427534 OVOL1O14753 267 aa10.71□□□□□ -0.7
SPG11-202ENST00000427534 NIT1Q86X76 327 aa10.71□□□□□ -0.7
SPG11-202ENST00000427534 C8orf49Q96NF6 230 aa10.71□□□□□ -0.7
SPG11-202ENST00000427534 CSTL1Q9H114 145 aa10.71□□□□□ -0.7
SPG11-202ENST00000427534 HIST1H4AP62805 103 aaKnown RBP10.7□□□□□ -0.7
SPG11-202ENST00000427534 SLC25A48Q6ZT89 311 aaKnown RBP10.7□□□□□ -0.7
SPG11-202ENST00000427534 HAPLN4Q86UW8 402 aa10.7□□□□□ -0.7
SPG11-202ENST00000427534 PRSS33Q8NF86 280 aa10.7□□□□□ -0.7
SPG11-202ENST00000427534 ZNF48Q96MX3 618 aaPredicted RBP10.7□□□□□ -0.7
SPG11-202ENST00000427534 RPL36AP83881 106 aaKnown RBP10.69□□□□□ -0.7
SPG11-202ENST00000427534 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
SPG11-202ENST00000427534 TREML4Q6UXN2 200 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 RPL36ALQ969Q0 106 aaKnown RBP10.69□□□□□ -0.7
SPG11-202ENST00000427534 Q9HAA7 133 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 SRRM5B3KS81 715 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 TMEM155Q4W5P6 130 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 A0A087WWC5 75 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 ATRAIDQ6UW56 229 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 ESM1Q9NQ30 184 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 SPCS1Q9Y6A9 102 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 LINC01619G3V211 115 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 IGKCP01834 107 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 LINC00479Q96M42 142 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 KIF26BQ2KJY2 2108 aa10.69□□□□□ -0.7
SPG11-202ENST00000427534 FREM3P0C091 2139 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 KIAA2026Q5HYC2 2103 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
SPG11-202ENST00000427534 PNRC2Q9NPJ4 139 aaKnown RBP10.68□□□□□ -0.7
SPG11-202ENST00000427534 TRBV7-1A0A0A6YYK4 115 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 VWC2LB2RUY7 222 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 NEGR1Q7Z3B1 354 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 NRN1Q9NPD7 142 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 DPM2O94777 84 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 SLC25A16P16260 332 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 PFN2P35080 140 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 GAGE6Q13070 117 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 TMEM86BQ8N661 226 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 SLC25A2Q9BXI2 301 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 HEPN1Q6WQI6 88 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 SIGLEC9Q9Y336 463 aa10.68□□□□□ -0.7
SPG11-202ENST00000427534 CEP250Q9BV73 2442 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 PRDM13Q9H4Q3 707 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 NXPH4O95158 308 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 Q6ZS92 163 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 LHFPL1Q86WI0 220 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 IGF2BP2-AS1Q96M15 143 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 SPRY2O43597 315 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 WISP1O95388 367 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 LAGE3Q14657 143 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 CADP27708 2225 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 M0R2P5 195 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 DOCK10Q96BY6 2186 aa10.67□□□□□ -0.7
SPG11-202ENST00000427534 FAM90A9PA6NNJ1 464 aa10.66□□□□□ -0.7
SPG11-202ENST00000427534 FGF16O43320 207 aa10.66□□□□□ -0.7
SPG11-202ENST00000427534 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
SPG11-202ENST00000427534 ATP5L2Q7Z4Y8 100 aa10.66□□□□□ -0.7
SPG11-202ENST00000427534 TOMM40O96008 361 aa10.66□□□□□ -0.7
SPG11-202ENST00000427534 DIAPH2-AS1Q14236 149 aa10.66□□□□□ -0.7
SPG11-202ENST00000427534 GBF1Q92538 1859 aa10.66□□□□□ -0.7
SPG11-202ENST00000427534 PRTN3P24158 256 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 TEX43Q6ZNM6 134 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 MEGF9Q9H1U4 602 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 GGTLC3B5MD39 225 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 B3GALT5-AS1P59052 145 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 ARTNQ5T4W7 220 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 GGTLC1Q9BX51 225 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 TRAV9-1A0A075B6T8 112 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 A0A1B0GWJ7 208 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 NTF4P34130 210 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 FRMPD3Q5JV73 1810 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms