RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 C12orf45Q8N5I9 185 aaPredicted RBP13.33□□□□□ -0.28
GPC1-205ENST00000427506 S100ZQ8WXG8 99 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 IGHV3OR16-12A0A075B7B8 117 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 ELOA3CA0A087WX78 387 aaPredicted RBP13.32□□□□□ -0.28
GPC1-205ENST00000427506 C11orf94C9JXX5 98 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 H3BRN7 92 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 FAM78BQ5VT40 261 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 LINC00299Q6ZSB3 139 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 SHANK2-AS3Q9BTD1 123 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 ARL6Q9H0F7 186 aa13.32□□□□□ -0.28
GPC1-205ENST00000427506 A0A0J9YX75 114 aa13.31□□□□□ -0.28
GPC1-205ENST00000427506 GOSR2O14653 212 aa13.31□□□□□ -0.28
GPC1-205ENST00000427506 PSG9Q00887 426 aa13.31□□□□□ -0.28
GPC1-205ENST00000427506 SLC38A11Q08AI6 406 aa13.31□□□□□ -0.28
GPC1-205ENST00000427506 C20orf173Q96LM9 149 aa13.31□□□□□ -0.28
GPC1-205ENST00000427506 CLUHP3Q96NS8 147 aa13.31□□□□□ -0.28
GPC1-205ENST00000427506 SLC35B3Q9H1N7 401 aa13.31□□□□□ -0.28
GPC1-205ENST00000427506 IGLL5B9A064 214 aa13.3□□□□□ -0.28
GPC1-205ENST00000427506 RPL7P18124 248 aaKnown RBP13.3□□□□□ -0.28
GPC1-205ENST00000427506 CAV2P51636 162 aa13.3□□□□□ -0.28
GPC1-205ENST00000427506 PLP1P60201 277 aa13.3□□□□□ -0.28
GPC1-205ENST00000427506 ARL16Q0P5N6 197 aa13.3□□□□□ -0.28
GPC1-205ENST00000427506 C2orf50Q96LR7 162 aa13.3□□□□□ -0.28
GPC1-205ENST00000427506 UHRF2Q96PU4 802 aa13.3□□□□□ -0.28
GPC1-205ENST00000427506 GGACTQ9BVM4 153 aa13.3□□□□□ -0.28
GPC1-205ENST00000427506 K7EPK0 472 aa13.29□□□□□ -0.28
GPC1-205ENST00000427506 DEDDO75618 318 aa13.29□□□□□ -0.28
GPC1-205ENST00000427506 PVALBP20472 110 aaPredicted RBP13.29□□□□□ -0.28
GPC1-205ENST00000427506 IGFL4Q6B9Z1 124 aa13.29□□□□□ -0.28
GPC1-205ENST00000427506 ZNF705AQ6ZN79 300 aaPredicted RBP13.29□□□□□ -0.28
GPC1-205ENST00000427506 Q6ZTC4 211 aa13.29□□□□□ -0.28
GPC1-205ENST00000427506 ZNF546Q86UE3 836 aa13.29□□□□□ -0.28
GPC1-205ENST00000427506 ZNF709Q8N972 641 aa13.29□□□□□ -0.28
GPC1-205ENST00000427506 LRRC20Q8TCA0 184 aa13.29□□□□□ -0.28
GPC1-205ENST00000427506 C17orf77Q96MU5 243 aa13.29□□□□□ -0.28
GPC1-205ENST00000427506 DNAH1Q9P2D7 4330 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 TRAV10A0A0B4J240 114 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 AGPAT2O15120 278 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 TCTAP57738 103 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 S100A10P60903 97 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 LGALS9CQ6DKI2 356 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 NEU1Q99519 415 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 CELA1Q9UNI1 258 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 RNF24Q9Y225 148 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 GOLT1BQ9Y3E0 138 aa13.28□□□□□ -0.28
GPC1-205ENST00000427506 ALMS1Q8TCU4 4167 aa13.27□□□□□ -0.28
GPC1-205ENST00000427506 SMIM9A6NGZ8 99 aa13.27□□□□□ -0.29
GPC1-205ENST00000427506 ZNF705FA8MVS1 300 aaPredicted RBP13.27□□□□□ -0.29
GPC1-205ENST00000427506 ZNF705DP0CH99 300 aaPredicted RBP13.27□□□□□ -0.29
GPC1-205ENST00000427506 ZNF705BP0CI00 300 aaPredicted RBP13.27□□□□□ -0.29
GPC1-205ENST00000427506 EMP1P54849 157 aa13.27□□□□□ -0.29
GPC1-205ENST00000427506 ASAH1Q13510 395 aa13.27□□□□□ -0.29
GPC1-205ENST00000427506 PXDC1Q5TGL8 231 aa13.27□□□□□ -0.29
GPC1-205ENST00000427506 PATE2Q6UY27 113 aa13.27□□□□□ -0.29
GPC1-205ENST00000427506 ZNF767PQ75MW2 155 aa13.27□□□□□ -0.29
GPC1-205ENST00000427506 RNF182Q8N6D2 247 aa13.27□□□□□ -0.29
GPC1-205ENST00000427506 ENKURQ8TC29 256 aa13.27□□□□□ -0.29
GPC1-205ENST00000427506 TRAV8-2A0A0B4J237 113 aa13.26□□□□□ -0.29
GPC1-205ENST00000427506 TMEM189A5PLL7 270 aa13.26□□□□□ -0.29
GPC1-205ENST00000427506 FAM24AA6NFZ4 105 aa13.26□□□□□ -0.29
GPC1-205ENST00000427506 CST7O76096 145 aa13.26□□□□□ -0.29
GPC1-205ENST00000427506 DUSP14O95147 198 aaKnown RBP13.26□□□□□ -0.29
GPC1-205ENST00000427506 RAB31Q13636 194 aa13.26□□□□□ -0.29
GPC1-205ENST00000427506 ZNF738Q8NE65 137 aa13.26□□□□□ -0.29
GPC1-205ENST00000427506 MGST2Q99735 147 aa13.26□□□□□ -0.29
GPC1-205ENST00000427506 RFNGQ9Y644 331 aa13.26□□□□□ -0.29
GPC1-205ENST00000427506 COX7A2P2O60397 106 aa13.25□□□□□ -0.29
GPC1-205ENST00000427506 SPART-AS1P0CW21 52 aa13.25□□□□□ -0.29
GPC1-205ENST00000427506 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
GPC1-205ENST00000427506 C12orf74Q32Q52 190 aa13.25□□□□□ -0.29
GPC1-205ENST00000427506 LINC00305Q7Z4B0 112 aa13.25□□□□□ -0.29
GPC1-205ENST00000427506 TMEM208Q9BTX3 173 aa13.25□□□□□ -0.29
GPC1-205ENST00000427506 GPN1Q9HCN4 374 aaPredicted RBP13.25□□□□□ -0.29
GPC1-205ENST00000427506 A6NHS1 94 aa13.24□□□□□ -0.29
GPC1-205ENST00000427506 UPK1BO75841 260 aa13.24□□□□□ -0.29
GPC1-205ENST00000427506 HBE1P02100 147 aa13.24□□□□□ -0.29
GPC1-205ENST00000427506 CAMLGP49069 296 aa13.24□□□□□ -0.29
GPC1-205ENST00000427506 RAB32Q13637 225 aa13.24□□□□□ -0.29
GPC1-205ENST00000427506 C11orf1Q9H5F2 150 aa13.24□□□□□ -0.29
GPC1-205ENST00000427506 UQCC1Q9NVA1 299 aa13.24□□□□□ -0.29
GPC1-205ENST00000427506 APLNQ9ULZ1 77 aa13.24□□□□□ -0.29
GPC1-205ENST00000427506 A0A087X0K7 114 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 DEFB131BA0A096LNP1 70 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 AMBPP02760 352 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 C10orf113Q5VZT2 155 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 Q6ZRG5 221 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 NRARPQ7Z6K4 114 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 STX12Q86Y82 276 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 C1orf158Q8N1D5 194 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 RPP25LQ8N5L8 163 aaKnown RBP13.23□□□□□ -0.29
GPC1-205ENST00000427506 IGF2BP2-AS1Q96M15 143 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 LYRM2Q9NU23 88 aaPredicted RBP13.23□□□□□ -0.29
GPC1-205ENST00000427506 PPP1R14DQ9NXH3 145 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 PTTG2Q9NZH5 202 aa13.23□□□□□ -0.29
GPC1-205ENST00000427506 PLECQ15149 4684 aaKnown RBP13.23□□□□□ -0.29
GPC1-205ENST00000427506 HYDINQ4G0P3 5121 aa13.22□□□□□ -0.29
GPC1-205ENST00000427506 IGHV4-4A0A075B6R2 117 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms