RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 LINC00299Q6ZSB3 139 aa11.43□□□□□ -0.58
HLA-DQB2-230ENST00000427449 OR8I2Q8N0Y5 310 aa11.43□□□□□ -0.58
HLA-DQB2-230ENST00000427449 BPIFCQ8NFQ6 507 aa11.43□□□□□ -0.58
HLA-DQB2-230ENST00000427449 NACAE9PAV3 2078 aa11.43□□□□□ -0.58
HLA-DQB2-230ENST00000427449 A0A087X0K7 114 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 A6NHS1 94 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 CRXO43186 299 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 LINC00869P0C866 280 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 ORM2P19652 201 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 RRAS2P62070 204 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 SLC38A11Q08AI6 406 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 CNPY1Q3B7I2 92 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 FAM78BQ5VT40 261 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 OR1B1Q8NGR6 318 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 ZNF431Q8TF32 576 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 MGST2Q99735 147 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 DOK5Q9P104 306 aa11.42□□□□□ -0.58
HLA-DQB2-230ENST00000427449 CENPXA8MT69 81 aa11.41□□□□□ -0.58
HLA-DQB2-230ENST00000427449 SCGB1D2O95969 90 aa11.41□□□□□ -0.58
HLA-DQB2-230ENST00000427449 IFNA21P01568 189 aa11.41□□□□□ -0.58
HLA-DQB2-230ENST00000427449 IGKV3-20P01619 116 aa11.41□□□□□ -0.58
HLA-DQB2-230ENST00000427449 RNF182Q8N6D2 247 aa11.41□□□□□ -0.58
HLA-DQB2-230ENST00000427449 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
HLA-DQB2-230ENST00000427449 RSG1Q9BU20 258 aa11.41□□□□□ -0.58
HLA-DQB2-230ENST00000427449 C1QTNF4Q9BXJ3 329 aa11.41□□□□□ -0.58
HLA-DQB2-230ENST00000427449 MEOX2P50222 304 aa11.4□□□□□ -0.58
HLA-DQB2-230ENST00000427449 ASAH1Q13510 395 aa11.4□□□□□ -0.58
HLA-DQB2-230ENST00000427449 VWC2Q2TAL6 325 aa11.4□□□□□ -0.58
HLA-DQB2-230ENST00000427449 ZNF767PQ75MW2 155 aa11.4□□□□□ -0.58
HLA-DQB2-230ENST00000427449 C2CD4CQ8TF44 421 aa11.4□□□□□ -0.58
HLA-DQB2-230ENST00000427449 AMBPP02760 352 aa11.39□□□□□ -0.59
HLA-DQB2-230ENST00000427449 GALR1P47211 349 aa11.39□□□□□ -0.59
HLA-DQB2-230ENST00000427449 SPATA31B1PQ5VZV4 182 aa11.39□□□□□ -0.59
HLA-DQB2-230ENST00000427449 TMEM37Q8WXS4 190 aa11.39□□□□□ -0.59
HLA-DQB2-230ENST00000427449 GPR82Q96P67 336 aa11.39□□□□□ -0.59
HLA-DQB2-230ENST00000427449 TMEM147Q9BVK8 224 aa11.39□□□□□ -0.59
HLA-DQB2-230ENST00000427449 NPVFQ9HCQ7 196 aa11.39□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PKHD1P08F94 4074 aa11.39□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PLAC8L1A1L4L8 177 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 SMCO3A2RU48 225 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 C11orf94C9JXX5 98 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 AGPAT2O15120 278 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 IL5P05113 134 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 CXCL3P19876 107 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 ID1P41134 155 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 SELENOTP62341 195 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 OR11H7Q8NGC8 314 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PPP1R14BQ96C90 147 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 GGACTQ9BVM4 153 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 GSKIPQ9P0R6 139 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PFDN2Q9UHV9 154 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 HIGD1AQ9Y241 93 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PKD1P98161 4303 aa11.38□□□□□ -0.59
HLA-DQB2-230ENST00000427449 IGHV4-4A0A075B6R2 117 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 TRAV10A0A0B4J240 114 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 IGSF23A1L1A6 192 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 H2AFB2P0C5Z0 115 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PRB4P10163 310 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 CNN1P51911 297 aaKnown RBP11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 TCTAP57738 103 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 NUTF2P61970 127 aaKnown RBP11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PSG9Q00887 426 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 SAMD13Q5VXD3 122 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 TEPPQ6URK8 271 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 C12orf45Q8N5I9 185 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 OR10P1Q8NGE3 313 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 C16orf92Q96LL3 132 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 ARV1Q9H2C2 271 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
HLA-DQB2-230ENST00000427449 FAM24AA6NFZ4 105 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 SLC17A3O00476 420 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 HYPMO75409 117 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PRM2P04554 102 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 IGLC2P0DOY2 106 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 RAB32Q13637 225 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 OR4B1Q8NGF8 309 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 C2orf50Q96LR7 162 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 ARL6Q9H0F7 186 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 DKK2Q9UBU2 259 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
HLA-DQB2-230ENST00000427449 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 IGLL5B9A064 214 aa11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 M0R2Z0 102 aa11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 UPK1BO75841 260 aa11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 ZNF546Q86UE3 836 aa11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 IGF2BP2-AS1Q96M15 143 aa11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 RNF126Q9BV68 326 aa11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 LYRM2Q9NU23 88 aaPredicted RBP11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 LSM5Q9Y4Y9 91 aaKnown RBP11.35□□□□□ -0.59
HLA-DQB2-230ENST00000427449 CST7O76096 145 aa11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 OR5G3P0C626 314 aa11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 RPL7P18124 248 aaKnown RBP11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 OPCMLQ14982 345 aa11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 SPINK13Q1W4C9 94 aa11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 BAP18Q8IXM2 172 aa11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 SAT2Q96F10 170 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 ZNF331Q9NQX6 463 aaPredicted RBP11.34□□□□□ -0.59
HLA-DQB2-230ENST00000427449 PLA2G2EQ9NZK7 142 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms