RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 MIFP14174 115 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 RPL7P18124 248 aaKnown RBP12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 DEFA1P59665 94 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 DEFA3P59666 94 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 IFITM3Q01628 133 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 RAB31Q13636 194 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 PXDC1Q5TGL8 231 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 EBLN2Q6P2I7 272 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 CEMP1Q6PRD7 247 aaPredicted RBP12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 ARL6Q9H0F7 186 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 RPRMQ9NS64 109 aa12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 KLK5Q9Y337 293 aaPredicted RBP12.72□□□□□ -0.37
SLC6A1-202ENST00000425938 ALMS1Q8TCU4 4167 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 FAM24AA6NFZ4 105 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 ZNF705EA8MWA4 302 aaPredicted RBP12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 AGPAT2O15120 278 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 DEFB4AO15263 64 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 PRAF2O60831 178 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 CST7O76096 145 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 RAB32Q13637 225 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 GDF5OSQ5U4N7 250 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 NRARPQ7Z6K4 114 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 STX12Q86Y82 276 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 Q8NAQ8 132 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 CSNK1G2-AS1Q8NCQ2 148 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 LYRM2Q9NU23 88 aaPredicted RBP12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 XCL2Q9UBD3 114 aa12.71□□□□□ -0.37
SLC6A1-202ENST00000425938 INMT-MINDY4F8WBC2 141 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 IGKV3-20P01619 116 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 DEFB1P60022 68 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 FGL1Q08830 312 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 IL15RAQ13261 267 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 OR4B1Q8NGF8 309 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 PHLDA1Q8WV24 401 aaPredicted RBP12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 CLUHP3Q96NS8 147 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 UHRF2Q96PU4 802 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 ARV1Q9H2C2 271 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 C11orf1Q9H5F2 150 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 UQCC1Q9NVA1 299 aa12.7□□□□□ -0.38
SLC6A1-202ENST00000425938 IGHV4-28A0A0C4DH34 117 aa12.69□□□□□ -0.38
SLC6A1-202ENST00000425938 SULT1A1P50225 295 aa12.69□□□□□ -0.38
SLC6A1-202ENST00000425938 HBG1P69891 147 aa12.69□□□□□ -0.38
SLC6A1-202ENST00000425938 HBG2P69892 147 aa12.69□□□□□ -0.38
SLC6A1-202ENST00000425938 COX7A2P2O60397 106 aa12.68□□□□□ -0.38
SLC6A1-202ENST00000425938 S100A11P31949 105 aa12.68□□□□□ -0.38
SLC6A1-202ENST00000425938 CAMLGP49069 296 aa12.68□□□□□ -0.38
SLC6A1-202ENST00000425938 NANOS2P60321 138 aaKnown RBP12.68□□□□□ -0.38
SLC6A1-202ENST00000425938 TMEM252Q8N6L7 170 aa12.68□□□□□ -0.38
SLC6A1-202ENST00000425938 C20orf173Q96LM9 149 aa12.68□□□□□ -0.38
SLC6A1-202ENST00000425938 MGST2Q99735 147 aa12.68□□□□□ -0.38
SLC6A1-202ENST00000425938 X6R8D5 127 aa12.68□□□□□ -0.38
SLC6A1-202ENST00000425938 ELOA3CA0A087WX78 387 aaPredicted RBP12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 A0A0J9YX75 114 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 IGSF23A1L1A6 192 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 F6UB75 175 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 RLN2P04090 185 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 RBMY1A1P0DJD3 496 aaKnown RBP12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 RBMY1CP0DJD4 496 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 PSG9Q00887 426 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 RBMY1FQ15415 496 aaKnown RBP12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 FAM78BQ5VT40 261 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 PATE2Q6UY27 113 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 Q6ZRG5 221 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 LINC00305Q7Z4B0 112 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 C17orf77Q96MU5 243 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 MARVELD1Q9BSK0 173 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 HRH4Q9H3N8 390 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 WDR83OSQ9Y284 106 aa12.67□□□□□ -0.38
SLC6A1-202ENST00000425938 A0A087X0K7 114 aa12.66□□□□□ -0.38
SLC6A1-202ENST00000425938 UBE2L5PA0A1B0GUS4 154 aa12.66□□□□□ -0.38
SLC6A1-202ENST00000425938 SIX6O95475 246 aa12.66□□□□□ -0.38
SLC6A1-202ENST00000425938 FXYD7P58549 80 aa12.66□□□□□ -0.38
SLC6A1-202ENST00000425938 CYCSP99999 105 aaKnown RBP12.66□□□□□ -0.38
SLC6A1-202ENST00000425938 LRRC20Q8TCA0 184 aa12.66□□□□□ -0.38
SLC6A1-202ENST00000425938 NMES1Q9C002 83 aa12.66□□□□□ -0.38
SLC6A1-202ENST00000425938 EPPK1P58107 5090 aaKnown RBP12.66□□□□□ -0.38
SLC6A1-202ENST00000425938 DUSP14O95147 198 aaKnown RBP12.65□□□□□ -0.38
SLC6A1-202ENST00000425938 BAXQ07812 192 aa12.65□□□□□ -0.38
SLC6A1-202ENST00000425938 ATP6V1FQ16864 119 aa12.65□□□□□ -0.38
SLC6A1-202ENST00000425938 VWC2Q2TAL6 325 aa12.65□□□□□ -0.38
SLC6A1-202ENST00000425938 C10orf113Q5VZT2 155 aa12.65□□□□□ -0.38
SLC6A1-202ENST00000425938 ZNF709Q8N972 641 aa12.65□□□□□ -0.38
SLC6A1-202ENST00000425938 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
SLC6A1-202ENST00000425938 TRAV8-2A0A0B4J237 113 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 E5RGE8 158 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 SSNA1O43805 119 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 LRRC37A5PQ49AS3 106 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 IGFL4Q6B9Z1 124 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 ZNF705AQ6ZN79 300 aaPredicted RBP12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 BPIFA4PQ86YQ2 179 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 RNF182Q8N6D2 247 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 OR1L4Q8NGR5 311 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 SLC25A31Q9H0C2 315 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 SLC35B3Q9H1N7 401 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 DNAJC4Q9NNZ3 241 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 GOLT1BQ9Y3E0 138 aa12.64□□□□□ -0.39
SLC6A1-202ENST00000425938 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
SLC6A1-202ENST00000425938 SMIM9A6NGZ8 99 aa12.63□□□□□ -0.39
SLC6A1-202ENST00000425938 CXCL2P19875 107 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms