RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 MIFP14174 115 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 DEFB1P60022 68 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 SELENOTP62341 195 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 GSG1LQ6UXU4 331 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 TMEM182Q6ZP80 229 aaPredicted RBP9.23□□□□□ -0.93
SGCE-203ENST00000425444 C12orf45Q8N5I9 185 aaPredicted RBP9.23□□□□□ -0.93
SGCE-203ENST00000425444 NPVFQ9HCQ7 196 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 XCL2Q9UBD3 114 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 TBC1D24Q9ULP9 559 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 HIGD1AQ9Y241 93 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
SGCE-203ENST00000425444 C7orf66A4D0T2 115 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 ZNF705EA8MWA4 302 aaPredicted RBP9.22□□□□□ -0.93
SGCE-203ENST00000425444 ISLRO14498 428 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 SOCS3O14543 225 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 OR5G3P0C626 314 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 LINC00869P0C866 280 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 BCAP31P51572 246 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 GDF5OSQ5U4N7 250 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 EBLN2Q6P2I7 272 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 TEPPQ6URK8 271 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 FOXI2Q6ZQN5 318 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 S100A7AQ86SG5 101 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 Q8NAQ8 132 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 OR4B1Q8NGF8 309 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 ENKURQ8TC29 256 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 GPR82Q96P67 336 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 RSG1Q9BU20 258 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 SCRT1Q9BWW7 348 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 SAV1Q9H4B6 383 aaPredicted RBP9.22□□□□□ -0.93
SGCE-203ENST00000425444 AGRNO00468 2067 aa9.22□□□□□ -0.93
SGCE-203ENST00000425444 FNDC10F2Z333 226 aa9.21□□□□□ -0.94
SGCE-203ENST00000425444 HYPMO75409 117 aa9.21□□□□□ -0.94
SGCE-203ENST00000425444 PVALBP20472 110 aaPredicted RBP9.21□□□□□ -0.94
SGCE-203ENST00000425444 CAV2P51636 162 aa9.21□□□□□ -0.94
SGCE-203ENST00000425444 FXYD7P58549 80 aa9.21□□□□□ -0.94
SGCE-203ENST00000425444 S100A10P60903 97 aa9.21□□□□□ -0.94
SGCE-203ENST00000425444 FGL1Q08830 312 aa9.21□□□□□ -0.94
SGCE-203ENST00000425444 SLC38A11Q08AI6 406 aa9.21□□□□□ -0.94
SGCE-203ENST00000425444 SLC25A39Q9BZJ4 359 aaPredicted RBP9.21□□□□□ -0.94
SGCE-203ENST00000425444 RPRMQ9NS64 109 aa9.21□□□□□ -0.94
SGCE-203ENST00000425444 H3BRN7 92 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 K7EPK0 472 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 ASAH1Q13510 395 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 SPATA31B1PQ5VZV4 182 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 ZNF546Q86UE3 836 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 CSNK1G2-AS1Q8NCQ2 148 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 C2orf50Q96LR7 162 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 SHANK2-AS3Q9BTD1 123 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 GGACTQ9BVM4 153 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 ARL6Q9H0F7 186 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 PTTG2Q9NZH5 202 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 X6R8D5 127 aa9.2□□□□□ -0.94
SGCE-203ENST00000425444 IGHV3OR16-12A0A075B7B8 117 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 A6NHS1 94 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 F6UB75 175 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 GOSR2O14653 212 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 UPK1BO75841 260 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 RBMY1A1P0DJD3 496 aaKnown RBP9.19□□□□□ -0.94
SGCE-203ENST00000425444 RBMY1CP0DJD4 496 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 RPL7P18124 248 aaKnown RBP9.19□□□□□ -0.94
SGCE-203ENST00000425444 ARL16Q0P5N6 197 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 RBMY1FQ15415 496 aaKnown RBP9.19□□□□□ -0.94
SGCE-203ENST00000425444 LRRC20Q8TCA0 184 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 UHRF2Q96PU4 802 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 ARV1Q9H2C2 271 aa9.19□□□□□ -0.94
SGCE-203ENST00000425444 CST7O76096 145 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 PLP1P60201 277 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 PSG9Q00887 426 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 FAM78BQ5VT40 261 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 STX12Q86Y82 276 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 C20orf173Q96LM9 149 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 SLC35B3Q9H1N7 401 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 HRH4Q9H3N8 390 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 GPN1Q9HCN4 374 aaPredicted RBP9.18□□□□□ -0.94
SGCE-203ENST00000425444 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 RNF24Q9Y225 148 aa9.18□□□□□ -0.94
SGCE-203ENST00000425444 A0A0J9YX75 114 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 FAM24AA6NFZ4 105 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 C11orf94C9JXX5 98 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 AGPAT2O15120 278 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 COX7A2P2O60397 106 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 HLA-DMBP28068 263 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 RAB31Q13636 194 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 RAB32Q13637 225 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 PXDC1Q5TGL8 231 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 RNF182Q8N6D2 247 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 C2CD4CQ8TF44 421 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 UQCC1Q9NVA1 299 aa9.17□□□□□ -0.94
SGCE-203ENST00000425444 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
SGCE-203ENST00000425444 ELOA3CA0A087WX78 387 aaPredicted RBP9.16□□□□□ -0.94
SGCE-203ENST00000425444 UBE2L5PA0A1B0GUS4 154 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 PRSS29PA6NIE9 313 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 CAMLGP49069 296 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 BAXQ07812 192 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 Q6ZTC4 211 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 LINC00305Q7Z4B0 112 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms