RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 RNF182Q8N6D2 247 aa10.47□□□□□ -0.73
ATG4B-209ENST00000425239 PPP1R14BQ96C90 147 aa10.47□□□□□ -0.73
ATG4B-209ENST00000425239 SLC25A22Q9H936 323 aa10.47□□□□□ -0.73
ATG4B-209ENST00000425239 TMEM128Q5BJH2 165 aa10.46□□□□□ -0.73
ATG4B-209ENST00000425239 OR1B1Q8NGR6 318 aa10.46□□□□□ -0.73
ATG4B-209ENST00000425239 SLIRPQ9GZT3 109 aaKnown RBP10.46□□□□□ -0.73
ATG4B-209ENST00000425239 LINC00588Q9Y4M8 146 aa10.46□□□□□ -0.73
ATG4B-209ENST00000425239 TRAV12-2A0A075B6T6 113 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 DUSP14O95147 198 aaKnown RBP10.45□□□□□ -0.74
ATG4B-209ENST00000425239 DEFB130BP0DP73 79 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 DEFB130AP0DP74 79 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 ANXA3P12429 323 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 ORM2P19652 201 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 TNFSF8P32971 234 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 B2MP61769 119 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 BAP18Q8IXM2 172 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 C6orf223Q8N319 242 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 GPR82Q96P67 336 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 TMEM208Q9BTX3 173 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 MCUBQ9NWR8 336 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 CCDC59Q9P031 241 aaKnown RBP10.45□□□□□ -0.74
ATG4B-209ENST00000425239 RSL24D1Q9UHA3 163 aaKnown RBP10.45□□□□□ -0.74
ATG4B-209ENST00000425239 TMED3Q9Y3Q3 217 aa10.45□□□□□ -0.74
ATG4B-209ENST00000425239 CBY3A6NI87 242 aa10.44□□□□□ -0.74
ATG4B-209ENST00000425239 PMS2P5A8MQ11 134 aa10.44□□□□□ -0.74
ATG4B-209ENST00000425239 C16orf90A8MZG2 172 aa10.44□□□□□ -0.74
ATG4B-209ENST00000425239 H3BRN7 92 aa10.44□□□□□ -0.74
ATG4B-209ENST00000425239 SYNGR2O43760 224 aa10.44□□□□□ -0.74
ATG4B-209ENST00000425239 INSP01308 110 aa10.44□□□□□ -0.74
ATG4B-209ENST00000425239 GPR141Q7Z602 305 aa10.44□□□□□ -0.74
ATG4B-209ENST00000425239 TRIM63Q969Q1 353 aa10.44□□□□□ -0.74
ATG4B-209ENST00000425239 SLC25A39Q9BZJ4 359 aaPredicted RBP10.44□□□□□ -0.74
ATG4B-209ENST00000425239 WRBO00258 174 aa10.43□□□□□ -0.74
ATG4B-209ENST00000425239 MRPS12O15235 138 aaKnown RBP10.43□□□□□ -0.74
ATG4B-209ENST00000425239 PLP1P60201 277 aa10.43□□□□□ -0.74
ATG4B-209ENST00000425239 BPIFCQ8NFQ6 507 aa10.43□□□□□ -0.74
ATG4B-209ENST00000425239 RNF141Q8WVD5 230 aa10.43□□□□□ -0.74
ATG4B-209ENST00000425239 ATG101Q9BSB4 218 aa10.43□□□□□ -0.74
ATG4B-209ENST00000425239 SHANK2-AS3Q9BTD1 123 aa10.43□□□□□ -0.74
ATG4B-209ENST00000425239 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
ATG4B-209ENST00000425239 FABP12A6NFH5 140 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 F5H768 121 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 ATP5G1P05496 136 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 CXCL3P19876 107 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 ATP5G3P48201 142 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 ID3Q02535 119 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 PATE2Q6UY27 113 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 TMEM144Q7Z5S9 345 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
ATG4B-209ENST00000425239 CIB3Q96Q77 187 aaPredicted RBP10.42□□□□□ -0.74
ATG4B-209ENST00000425239 MRPS26Q9BYN8 205 aaKnown RBP10.42□□□□□ -0.74
ATG4B-209ENST00000425239 A0A087X0K7 114 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 PIGBOS1A0A0B4J2F0 54 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 BOLA2-SMG1P6H3BVE0 249 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 MED6O75586 246 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 SFT2D2O95562 160 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 NUDT3O95989 172 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 TMBIM6P55061 237 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 TAS2R60P59551 318 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 PPP1R1AQ13522 171 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 SPANXN5Q5MJ07 72 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 ACOT7LQ6ZUV0 252 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 TMED4Q7Z7H5 227 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 Q8N1X5 172 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 LINC00612Q8N6U2 182 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 OR8A1Q8NGG7 326 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 RNASE8Q8TDE3 154 aaKnown RBP10.41□□□□□ -0.74
ATG4B-209ENST00000425239 RAB2BQ8WUD1 216 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 TMEM147Q9BVK8 224 aa10.41□□□□□ -0.74
ATG4B-209ENST00000425239 PAIP2BQ9ULR5 123 aaKnown RBP10.41□□□□□ -0.74
ATG4B-209ENST00000425239 PRB4P10163 310 aaPredicted RBP10.4□□□□□ -0.74
ATG4B-209ENST00000425239 CCL18P55774 89 aa10.4□□□□□ -0.74
ATG4B-209ENST00000425239 PSG3Q16557 428 aa10.4□□□□□ -0.74
ATG4B-209ENST00000425239 CYP2G1PQ6ZSU1 146 aa10.4□□□□□ -0.74
ATG4B-209ENST00000425239 TMEM256Q8N2U0 113 aa10.4□□□□□ -0.74
ATG4B-209ENST00000425239 UHRF2Q96PU4 802 aa10.4□□□□□ -0.74
ATG4B-209ENST00000425239 LINC01587Q99440 93 aa10.4□□□□□ -0.74
ATG4B-209ENST00000425239 BCL7BQ9BQE9 202 aa10.4□□□□□ -0.74
ATG4B-209ENST00000425239 Q9H8V8 135 aa10.4□□□□□ -0.74
ATG4B-209ENST00000425239 H3BP45 60 aa10.39□□□□□ -0.75
ATG4B-209ENST00000425239 HOXB5P09067 269 aa10.39□□□□□ -0.75
ATG4B-209ENST00000425239 RPP30P78346 268 aaKnown RBP10.39□□□□□ -0.75
ATG4B-209ENST00000425239 FGL1Q08830 312 aa10.39□□□□□ -0.75
ATG4B-209ENST00000425239 SSX7Q7RTT5 188 aa10.39□□□□□ -0.75
ATG4B-209ENST00000425239 ZNF738Q8NE65 137 aa10.39□□□□□ -0.75
ATG4B-209ENST00000425239 TIMM8BQ9Y5J9 83 aaPredicted RBP10.39□□□□□ -0.75
ATG4B-209ENST00000425239 V9GYH0 126 aa10.39□□□□□ -0.75
ATG4B-209ENST00000425239 K7EPK0 472 aa10.38□□□□□ -0.75
ATG4B-209ENST00000425239 CCNKO75909 580 aa10.38□□□□□ -0.75
ATG4B-209ENST00000425239 RPL7P18124 248 aaKnown RBP10.38□□□□□ -0.75
ATG4B-209ENST00000425239 VAMP1P23763 118 aa10.38□□□□□ -0.75
ATG4B-209ENST00000425239 KRTAP10-2P60368 255 aa10.38□□□□□ -0.75
ATG4B-209ENST00000425239 POLR2GP62487 172 aaKnown RBP eCLIP10.38□□□□□ -0.75
ATG4B-209ENST00000425239 HIST1H1AQ02539 215 aaPredicted RBP10.38□□□□□ -0.75
ATG4B-209ENST00000425239 AKR1C1Q04828 323 aa10.38□□□□□ -0.75
ATG4B-209ENST00000425239 ZBTB8BQ8NAP8 495 aaPredicted RBP10.38□□□□□ -0.75
ATG4B-209ENST00000425239 C16orf74Q96GX8 76 aa10.38□□□□□ -0.75
ATG4B-209ENST00000425239 SLC25A21Q9BQT8 299 aaPredicted RBP10.38□□□□□ -0.75
ATG4B-209ENST00000425239 NOP10Q9NPE3 64 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms