RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 RAP2BP61225 183 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 TMEM217Q8N7C4 229 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 C20orf173Q96LM9 149 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 LINC00052Q96N35 136 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 UHRF2Q96PU4 802 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 NMES1Q9C002 83 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 ARL6Q9H0F7 186 aa13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 SAV1Q9H4B6 383 aaPredicted RBP13.02□□□□□ -0.33
IGHV3-47-201ENST00000425060 ZNF705EA8MWA4 302 aaPredicted RBP13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 OR5G3P0C626 314 aa13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 PXDC1Q5TGL8 231 aa13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 SAMD13Q5VXD3 122 aa13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 FOXI2Q6ZQN5 318 aa13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 ZNF546Q86UE3 836 aa13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 CLUHP3Q96NS8 147 aa13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 C11orf68Q9H3H3 251 aaKnown RBP13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 WDR83OSQ9Y284 106 aa13.01□□□□□ -0.33
IGHV3-47-201ENST00000425060 LCE6AA0A183 80 aa13□□□□□ -0.33
IGHV3-47-201ENST00000425060 MRPS12O15235 138 aaKnown RBP13□□□□□ -0.33
IGHV3-47-201ENST00000425060 S100A11P31949 105 aa13□□□□□ -0.33
IGHV3-47-201ENST00000425060 ARV1Q9H2C2 271 aa13□□□□□ -0.33
IGHV3-47-201ENST00000425060 UQCC1Q9NVA1 299 aa13□□□□□ -0.33
IGHV3-47-201ENST00000425060 X6R8D5 127 aa13□□□□□ -0.33
IGHV3-47-201ENST00000425060 TRAV8-2A0A0B4J237 113 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 H0YIZ8 118 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 RPL7P18124 248 aaKnown RBP12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 CAMLGP49069 296 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 H2BFSP57053 126 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 PRR20EP86478 221 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 PRR20CP86479 221 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 PRR20DP86480 221 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 PRR20BP86481 221 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 PRR20AP86496 221 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 Q8NAQ8 132 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 TMEM37Q8WXS4 190 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 C16orf92Q96LL3 132 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 CLEC5AQ9NY25 188 aa12.99□□□□□ -0.33
IGHV3-47-201ENST00000425060 A0A087X0K7 114 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 A0A0J9YX75 114 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 F6UB75 175 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 NUTF2P61970 127 aaKnown RBP12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 CYCSP99999 105 aaKnown RBP12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 ATP6V1FQ16864 119 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 SPATA31B1PQ5VZV4 182 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 S100A7AQ86SG5 101 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 STX12Q86Y82 276 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 CHAC2Q8WUX2 184 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 OR5AC2Q9NZP5 309 aa12.98□□□□□ -0.33
IGHV3-47-201ENST00000425060 DNAH1Q9P2D7 4330 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 A8MTW9 85 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 HBG1P69891 147 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 HBG2P69892 147 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 MIC13Q5XKP0 118 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 IGFL4Q6B9Z1 124 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 LINC00305Q7Z4B0 112 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 ZNF709Q8N972 641 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 C1QTNF4Q9BXJ3 329 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 RPRMQ9NS64 109 aa12.97□□□□□ -0.33
IGHV3-47-201ENST00000425060 E5RGE8 158 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 DEFB4AO15263 64 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 RLN2P04090 185 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 RBMY1A1P0DJD3 496 aaKnown RBP12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 RBMY1CP0DJD4 496 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 MIFP14174 115 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 RPL29P47914 159 aaKnown RBP12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 NHLH2Q02577 135 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 RAB31Q13636 194 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 PMS2P11Q13670 270 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 RBMY1FQ15415 496 aaKnown RBP12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 MORN5Q5VZ52 161 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 XCL2Q9UBD3 114 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 RNF24Q9Y225 148 aa12.96□□□□□ -0.33
IGHV3-47-201ENST00000425060 ELOA3CA0A087WX78 387 aaPredicted RBP12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 UBE2L5PA0A1B0GUS4 154 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 CXorf65A6NEN9 183 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 IGKV3-20P01619 116 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 OPCMLQ14982 345 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 LRRC37A5PQ49AS3 106 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 FAM78BQ5VT40 261 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 CEMP1Q6PRD7 247 aaPredicted RBP12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 PPP1R1CQ8WVI7 109 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 RNF126Q9BV68 326 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 DNAJC4Q9NNZ3 241 aa12.95□□□□□ -0.34
IGHV3-47-201ENST00000425060 SSNA1O43805 119 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 COX7A2P2O60397 106 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 CXCL3P19876 107 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 PSG9Q00887 426 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 FGL1Q08830 312 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 C10orf113Q5VZT2 155 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 AMTNQ6UX39 209 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 ZNF705AQ6ZN79 300 aaPredicted RBP12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 Q6ZRG5 221 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 RNF182Q8N6D2 247 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 OR4B1Q8NGF8 309 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 SLC25A31Q9H0C2 315 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 SLC35B3Q9H1N7 401 aa12.94□□□□□ -0.34
IGHV3-47-201ENST00000425060 NUPR2A6NF83 97 aa12.93□□□□□ -0.34
IGHV3-47-201ENST00000425060 FXYD7P58549 80 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms