RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 HBG2P69892 147 aa11.05□□□□□ -0.64
USB1-202ENST00000423271 VWC2Q2TAL6 325 aa11.05□□□□□ -0.64
USB1-202ENST00000423271 SIGLEC15Q6ZMC9 328 aa11.05□□□□□ -0.64
USB1-202ENST00000423271 TMEM147Q9BVK8 224 aa11.05□□□□□ -0.64
USB1-202ENST00000423271 KLK5Q9Y337 293 aaPredicted RBP11.05□□□□□ -0.64
USB1-202ENST00000423271 UBE2L5PA0A1B0GUS4 154 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 AGPAT2O15120 278 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 CFDP00746 253 aaPredicted RBP11.04□□□□□ -0.64
USB1-202ENST00000423271 SPP1P10451 314 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 AP2S1P53680 142 aaPredicted RBP11.04□□□□□ -0.64
USB1-202ENST00000423271 ATP6V1FQ16864 119 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 Q8NAQ8 132 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 C11orf45Q8TAV5 145 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 MGST2Q99735 147 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 NRN1Q9NPD7 142 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 FBXL17Q9UF56 701 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 WDR83OSQ9Y284 106 aa11.04□□□□□ -0.64
USB1-202ENST00000423271 ORM2P19652 201 aa11.03□□□□□ -0.64
USB1-202ENST00000423271 BAXQ07812 192 aa11.03□□□□□ -0.64
USB1-202ENST00000423271 CLINT1Q14677 625 aa11.03□□□□□ -0.64
USB1-202ENST00000423271 Q5BKY6 102 aa11.03□□□□□ -0.64
USB1-202ENST00000423271 MORN3Q6PF18 240 aaPredicted RBP11.03□□□□□ -0.64
USB1-202ENST00000423271 OR5C1Q8NGR4 320 aa11.03□□□□□ -0.64
USB1-202ENST00000423271 THAP6Q8TBB0 222 aa11.03□□□□□ -0.64
USB1-202ENST00000423271 DOK5Q9P104 306 aa11.03□□□□□ -0.64
USB1-202ENST00000423271 SLC45A2Q9UMX9 530 aa11.03□□□□□ -0.64
USB1-202ENST00000423271 IGHV4-28A0A0C4DH34 117 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 LINC00869P0C866 280 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 RBMY1A1P0DJD3 496 aaKnown RBP11.02□□□□□ -0.65
USB1-202ENST00000423271 RBMY1CP0DJD4 496 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 RPL12P30050 165 aaKnown RBP11.02□□□□□ -0.65
USB1-202ENST00000423271 NUP62P37198 522 aaPredicted RBP11.02□□□□□ -0.65
USB1-202ENST00000423271 RAP2BP61225 183 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 SELENOTP62341 195 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 RBMY1FQ15415 496 aaKnown RBP11.02□□□□□ -0.65
USB1-202ENST00000423271 ZNF546Q86UE3 836 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 OR1B1Q8NGR6 318 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 ASB13Q8WXK3 278 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 PPP1R14BQ96C90 147 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 MFFQ9GZY8 342 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 HSPB11Q9Y547 144 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 X6R8D5 127 aa11.02□□□□□ -0.65
USB1-202ENST00000423271 ZNF705EA8MWA4 302 aaPredicted RBP11.01□□□□□ -0.65
USB1-202ENST00000423271 FGF7P21781 194 aa11.01□□□□□ -0.65
USB1-202ENST00000423271 CAMLGP49069 296 aa11.01□□□□□ -0.65
USB1-202ENST00000423271 DEFB1P60022 68 aa11.01□□□□□ -0.65
USB1-202ENST00000423271 PLP1P60201 277 aa11.01□□□□□ -0.65
USB1-202ENST00000423271 SNRPD3P62318 126 aaKnown RBP11.01□□□□□ -0.65
USB1-202ENST00000423271 TMEM41BQ5BJD5 291 aa11.01□□□□□ -0.65
USB1-202ENST00000423271 CSNK1G2-AS1Q8NCQ2 148 aa11.01□□□□□ -0.65
USB1-202ENST00000423271 CHAC2Q8WUX2 184 aa11.01□□□□□ -0.65
USB1-202ENST00000423271 PFDN2Q9UHV9 154 aa11.01□□□□□ -0.65
USB1-202ENST00000423271 FGL1Q08830 312 aa11□□□□□ -0.65
USB1-202ENST00000423271 MIC13Q5XKP0 118 aa11□□□□□ -0.65
USB1-202ENST00000423271 OR2T35Q8NGX2 323 aa11□□□□□ -0.65
USB1-202ENST00000423271 SMIM3Q9BZL3 60 aa11□□□□□ -0.65
USB1-202ENST00000423271 SEPSECSQ9HD40 501 aaKnown RBP11□□□□□ -0.65
USB1-202ENST00000423271 H3BMM0 161 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 HYPMO75409 117 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 OR5G3P0C626 314 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 MIFP14174 115 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 RAB31Q13636 194 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 OPCMLQ14982 345 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 GDF5OSQ5U4N7 250 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 PATE2Q6UY27 113 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 SCRT1Q9BWW7 348 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 ARL6Q9H0F7 186 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 HIGD1AQ9Y241 93 aa10.99□□□□□ -0.65
USB1-202ENST00000423271 ELOA3CA0A087WX78 387 aaPredicted RBP10.98□□□□□ -0.65
USB1-202ENST00000423271 ZNF98A6NK75 572 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 G3V3Q6 166 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 H3BRN7 92 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 SOCS3O14543 225 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 HLA-DRB4P13762 266 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 PRR20EP86478 221 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 PRR20CP86479 221 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 PRR20DP86480 221 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 PRR20BP86481 221 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 PRR20AP86496 221 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 C1orf194Q5T5A4 169 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 RPP25LQ8N5L8 163 aaKnown RBP10.98□□□□□ -0.65
USB1-202ENST00000423271 UHRF2Q96PU4 802 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 ATP5SQ99766 215 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 NPCDR1Q9BY65 106 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 SLC25A39Q9BZJ4 359 aaPredicted RBP10.98□□□□□ -0.65
USB1-202ENST00000423271 SLC25A22Q9H936 323 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 WFDC1Q9HC57 220 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 XCL2Q9UBD3 114 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 HLA-DRB4X5D2U9 266 aa10.98□□□□□ -0.65
USB1-202ENST00000423271 FXYD6-FXYD2A0A087WZ82 144 aa10.97□□□□□ -0.65
USB1-202ENST00000423271 MPDU1O75352 247 aa10.97□□□□□ -0.65
USB1-202ENST00000423271 RPL29P47914 159 aaKnown RBP10.97□□□□□ -0.65
USB1-202ENST00000423271 PXDC1Q5TGL8 231 aa10.97□□□□□ -0.65
USB1-202ENST00000423271 Q6ZNX1 250 aa10.97□□□□□ -0.65
USB1-202ENST00000423271 OR8I2Q8N0Y5 310 aa10.97□□□□□ -0.65
USB1-202ENST00000423271 LINC00052Q96N35 136 aa10.97□□□□□ -0.65
USB1-202ENST00000423271 AQP10Q96PS8 301 aa10.97□□□□□ -0.65
USB1-202ENST00000423271 SHANK2-AS3Q9BTD1 123 aa10.97□□□□□ -0.65
USB1-202ENST00000423271 WDR61Q9GZS3 305 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms