RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ATP6V0E1O15342 81 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 RPL15P61313 204 aaKnown RBP6.9□□□□□ -1.3
SNCA-206ENST00000420646 FOXL1Q12952 345 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 ACTL10Q5JWF8 245 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 IBA57Q5T440 356 aaKnown RBP6.9□□□□□ -1.3
SNCA-206ENST00000420646 IGFL4Q6B9Z1 124 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 MRPL54Q6P161 138 aaKnown RBP6.9□□□□□ -1.3
SNCA-206ENST00000420646 LINC00322Q6ZN03 302 aaPredicted RBP6.9□□□□□ -1.3
SNCA-206ENST00000420646 ZNF491Q8N8L2 437 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 CHRDL1Q9BU40 450 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 Q9H3A6 140 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 IGLV11-55A0A075B6I3 123 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 NPFFO15130 113 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 FAM106CPP0CH98 169 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 CD99P14209 185 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 TMEM256Q8N2U0 113 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 PRO1933Q9H354 126 aa6.9□□□□□ -1.3
SNCA-206ENST00000420646 IGHV3-66A0A0C4DH42 116 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 M0R3E3 92 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 HIST1H1BP16401 226 aaKnown RBP6.9□□□□□ -1.31
SNCA-206ENST00000420646 CD33P20138 364 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 ADMP35318 185 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 MYCNOSP40205 109 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 LY6EQ16553 131 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 RNF2Q99496 336 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 HIST1H2BLQ99880 126 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 IL36BQ9NZH7 164 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 EPDR1Q9UM22 224 aa6.9□□□□□ -1.31
SNCA-206ENST00000420646 ZNF705GA8MUZ8 300 aaPredicted RBP6.89□□□□□ -1.31
SNCA-206ENST00000420646 F2Z2F3 143 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 S100A2P29034 98 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 PDLIM4P50479 330 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 CNN1P51911 297 aaKnown RBP6.89□□□□□ -1.31
SNCA-206ENST00000420646 RELQ04864 619 aaPredicted RBP6.89□□□□□ -1.31
SNCA-206ENST00000420646 MINOS1Q5TGZ0 78 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 UNQ5815/PRO19632Q6UWF5 114 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 RNF125Q96EQ8 232 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 SELENOKQ9Y6D0 94 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 MINOS1-NBL1R4GNA1 71 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 IGHV3-49A0A0A0MS15 119 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 GCGP01275 180 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 RAB4BP61018 213 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 SRSF1Q07955 248 aaKnown RBP eCLIP6.89□□□□□ -1.31
SNCA-206ENST00000420646 OR1L6Q8NGR2 347 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 MRPL27Q9P0M9 148 aaKnown RBP6.89□□□□□ -1.31
SNCA-206ENST00000420646 FBXL7Q9UJT9 491 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 CDC42EP3Q9UKI2 254 aa6.89□□□□□ -1.31
SNCA-206ENST00000420646 AVPP01185 164 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 AMY1AP04745 511 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 TAS2R60P59551 318 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 RPEL1Q2QD12 228 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 GOLT1AQ6ZVE7 132 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 C21orf62Q9NYP8 219 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 SNURFLB1AK76 121 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 TYMSP04818 313 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 GPR183P32249 361 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 PCP4P48539 62 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 UBE2G1P62253 170 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 EBI3Q14213 229 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 C15orf32Q32M92 178 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 Q6ZS46 218 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 CIARTQ8N365 385 aaPredicted RBP6.88□□□□□ -1.31
SNCA-206ENST00000420646 NUDT10Q8NFP7 164 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 C10orf105Q8TEF2 133 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 NUDT11Q96G61 164 aa6.88□□□□□ -1.31
SNCA-206ENST00000420646 PACRGQ96M98 296 aaPredicted RBP6.88□□□□□ -1.31
SNCA-206ENST00000420646 ZNF207O43670 478 aaKnown RBP6.87□□□□□ -1.31
SNCA-206ENST00000420646 AMBPP02760 352 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 CTSGP08311 255 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 GZMBP10144 247 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 G0S2P27469 103 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 TTC9CQ8N5M4 171 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 PITPNC1Q9UKF7 332 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 ARL2-SNX15V9GYD0 113 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 VWC2LB2RUY7 222 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 TCRAP04437 139 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 CLEC3BP05452 202 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 MFAP4P55083 255 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 PLP1P60201 277 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 KRTAP10-9P60411 292 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 CLEC2AQ6UVW9 174 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 PRNTQ86SH4 94 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 PIFOQ8TCI5 191 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 ATG101Q9BSB4 218 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 PIMREGQ9BSJ6 248 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 MRPL18Q9H0U6 180 aaKnown RBP6.87□□□□□ -1.31
SNCA-206ENST00000420646 PRDM13Q9H4Q3 707 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 GNB4Q9HAV0 340 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 NPIPB5A8MRT5 1133 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 TCAPO15273 167 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 HLA-DMBP28068 263 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 BRS3P32247 399 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 RHOGP84095 191 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 TCF24Q7RTU0 167 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 STXBP6Q8NFX7 210 aa6.87□□□□□ -1.31
SNCA-206ENST00000420646 PAX8Q06710 450 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 TMEM183AQ8IXX5 376 aa6.86□□□□□ -1.31
SNCA-206ENST00000420646 NOL4LQ96MY1 436 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms