RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 ZNF331Q9NQX6 463 aaPredicted RBP10.26□□□□□ -0.77
LINC00642-201ENST00000419459 GATA3P23771 443 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 UBE2E1P51965 193 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 IBA57Q5T440 356 aaKnown RBP10.25□□□□□ -0.77
LINC00642-201ENST00000419459 UNQ5815/PRO19632Q6UWF5 114 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 Q71RC1 249 aaPredicted RBP10.25□□□□□ -0.77
LINC00642-201ENST00000419459 SMIM15Q7Z3B0 74 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 OR4F17Q8NGA8 305 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 ZNF596Q8TC21 504 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 ST6GALNAC6Q969X2 333 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 MRPL20Q9BYC9 149 aaKnown RBP10.25□□□□□ -0.77
LINC00642-201ENST00000419459 WNT10AQ9GZT5 417 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 C1RLQ9NZP8 487 aa10.25□□□□□ -0.77
LINC00642-201ENST00000419459 HSBP1O75506 76 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 CD24P25063 80 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 HTR1DP28221 377 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 LINC00311Q8N616 119 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 CHRDL1Q9BU40 450 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 TECRQ9NZ01 308 aaKnown RBP10.24□□□□□ -0.77
LINC00642-201ENST00000419459 A0A1W2PRE2 83 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 FAM181BA6NEQ2 426 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 PLXNB1O43157 2135 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 TAS2R45P59539 299 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 UBE2G1P62253 170 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 RELBQ01201 579 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 ZNF833PQ6ZTB9 187 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 FAM231DQ6ZW35 169 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 C8orf31Q8N9H6 132 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 SSMEM1Q8WWF3 244 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 RPEQ96AT9 228 aa10.24□□□□□ -0.77
LINC00642-201ENST00000419459 TRAV34A0A0B4J273 112 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 NPFFO15130 113 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 OR2J3O76001 311 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 IGKV1-16P04430 117 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 CT45A6P0DMU7 189 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 CT45A5P0DMU8 189 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 CT45A7P0DMV0 189 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 CRYBB3P26998 211 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 AJUBAQ96IF1 538 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 IGF2BP2-AS1Q96M15 143 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 S1PR3Q99500 378 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 RNASE7Q9H1E1 156 aaKnown RBP10.23□□□□□ -0.77
LINC00642-201ENST00000419459 ST20Q9HBF5 79 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 TCF19Q9Y242 345 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 IGHV1-69DA0A0B4J2H0 117 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 FCGR3BO75015 233 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 IGHV1-69P01742 117 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 NTF3P20783 257 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 NPY1RP25929 384 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 ZNF137PP52743 207 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 ATP5IP56385 69 aaPredicted RBP10.23□□□□□ -0.77
LINC00642-201ENST00000419459 PSG5Q15238 335 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 SPATA31B1PQ5VZV4 182 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 FAM19A2Q8N3H0 131 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 DPM3Q9P2X0 92 aa10.23□□□□□ -0.77
LINC00642-201ENST00000419459 TNCP24821 2201 aa10.22□□□□□ -0.77
LINC00642-201ENST00000419459 LY6LH3BQJ8 138 aa10.22□□□□□ -0.77
LINC00642-201ENST00000419459 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
LINC00642-201ENST00000419459 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
LINC00642-201ENST00000419459 MRPL54Q6P161 138 aaKnown RBP10.22□□□□□ -0.77
LINC00642-201ENST00000419459 ATP5L2Q7Z4Y8 100 aa10.22□□□□□ -0.77
LINC00642-201ENST00000419459 BCL6BQ8N143 479 aaPredicted RBP10.22□□□□□ -0.77
LINC00642-201ENST00000419459 IGHV1-3A0A0C4DH29 117 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 A0A1W2PPI3 338 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 C15orf61A6NNL5 157 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 M0R2Z0 102 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 TIMM23O14925 209 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 IGLL1P15814 213 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 PET117Q6UWS5 81 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 VKORC1L1Q8N0U8 176 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 PLEKHA3Q9HB20 300 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 YAE1D1Q9NRH1 226 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 TMEM140Q9NV12 185 aa10.21□□□□□ -0.77
LINC00642-201ENST00000419459 FOXA2Q9Y261 457 aaPredicted RBP10.21□□□□□ -0.77
LINC00642-201ENST00000419459 AMMECR1Q9Y4X0 333 aaPredicted RBP10.21□□□□□ -0.77
LINC00642-201ENST00000419459 C2orf70A6NJV1 201 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 J3QLI3 93 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 CD5LO43866 347 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 SPINK4O60575 86 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 SLAQ13239 276 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 FXYD3Q14802 87 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 MIR17HGQ75NE6 70 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 MOB3BQ86TA1 216 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.21□□□□□ -0.78
LINC00642-201ENST00000419459 DDB2Q92466 427 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 NABP2Q9BQ15 211 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 TMEM70Q9BUB7 260 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 ENY2Q9NPA8 101 aa10.21□□□□□ -0.78
LINC00642-201ENST00000419459 LY6G6DO95868 133 aa10.2□□□□□ -0.78
LINC00642-201ENST00000419459 TCL1AP56279 114 aa10.2□□□□□ -0.78
LINC00642-201ENST00000419459 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
LINC00642-201ENST00000419459 VAMP3Q15836 100 aa10.2□□□□□ -0.78
LINC00642-201ENST00000419459 TNXAQ16473 311 aa10.2□□□□□ -0.78
LINC00642-201ENST00000419459 FAM120AOSQ5T036 256 aa10.2□□□□□ -0.78
LINC00642-201ENST00000419459 C12orf54Q6X4T0 127 aa10.2□□□□□ -0.78
LINC00642-201ENST00000419459 OR4S2Q8NH73 311 aa10.2□□□□□ -0.78
LINC00642-201ENST00000419459 RITA1Q96K30 269 aa10.2□□□□□ -0.78
LINC00642-201ENST00000419459 MRPL32Q9BYC8 188 aaKnown RBP10.2□□□□□ -0.78
LINC00642-201ENST00000419459 FN1P02751 2386 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms