RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ATG101Q9BSB4 218 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 KLF12Q9Y4X4 402 aa13.05□□□□□ -0.32
SSBP3-205ENST00000417664 APCP25054 2843 aa13.04□□□□□ -0.32
SSBP3-205ENST00000417664 PGPEP1LA6NFU8 196 aa13.04□□□□□ -0.32
SSBP3-205ENST00000417664 TMEM183BQ1AE95 376 aa13.04□□□□□ -0.32
SSBP3-205ENST00000417664 CLEC19AQ6UXS0 136 aa13.04□□□□□ -0.32
SSBP3-205ENST00000417664 FAM210BQ96KR6 192 aa13.04□□□□□ -0.32
SSBP3-205ENST00000417664 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
SSBP3-205ENST00000417664 PYGO2Q9BRQ0 406 aa13.04□□□□□ -0.32
SSBP3-205ENST00000417664 VPREB3Q9UKI3 123 aa13.04□□□□□ -0.32
SSBP3-205ENST00000417664 TOMM20LQ6UXN7 152 aa13.03□□□□□ -0.32
SSBP3-205ENST00000417664 OR10G8Q8NGN5 311 aa13.03□□□□□ -0.32
SSBP3-205ENST00000417664 FOXC2Q99958 501 aa13.03□□□□□ -0.32
SSBP3-205ENST00000417664 LINC00527Q9UJ94 153 aa13.03□□□□□ -0.32
SSBP3-205ENST00000417664 TENM4Q6N022 2769 aa13.03□□□□□ -0.32
SSBP3-205ENST00000417664 MAP1AP78559 2803 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-205ENST00000417664 TGIF2-C20orf24A0A0A6YYL0 155 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 A0A0G2JLM5 398 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 K7EN84 100 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 GCGP01275 180 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 IGLV1-40P01703 118 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 CXCL1P09341 107 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 TPPP2P59282 170 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 FOXL1Q12952 345 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 FAM209BQ5JX69 171 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 FMC1Q96HJ9 113 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 GPR82Q96P67 336 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.32
SSBP3-205ENST00000417664 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.32
SSBP3-205ENST00000417664 TMEM89A2RUT3 159 aa13.02□□□□□ -0.33
SSBP3-205ENST00000417664 GGCTO75223 188 aaKnown RBP13.02□□□□□ -0.33
SSBP3-205ENST00000417664 RPS10P46783 165 aaKnown RBP13.02□□□□□ -0.33
SSBP3-205ENST00000417664 UBE2G1P62253 170 aa13.02□□□□□ -0.33
SSBP3-205ENST00000417664 CFHR3Q02985 330 aa13.02□□□□□ -0.33
SSBP3-205ENST00000417664 ARL6IP6Q8N6S5 226 aa13.02□□□□□ -0.33
SSBP3-205ENST00000417664 CMTM2Q8TAZ6 248 aa13.02□□□□□ -0.33
SSBP3-205ENST00000417664 ZNF414Q96IQ9 312 aa13.02□□□□□ -0.33
SSBP3-205ENST00000417664 OSTCQ9NRP0 149 aa13.02□□□□□ -0.33
SSBP3-205ENST00000417664 ISLRO14498 428 aa13.01□□□□□ -0.33
SSBP3-205ENST00000417664 TCRAP04437 139 aa13.01□□□□□ -0.33
SSBP3-205ENST00000417664 HIST2H2BCQ6DN03 193 aa13.01□□□□□ -0.33
SSBP3-205ENST00000417664 BAGE2Q86Y30 109 aa13.01□□□□□ -0.33
SSBP3-205ENST00000417664 WFDC11Q8NEX6 87 aa13.01□□□□□ -0.33
SSBP3-205ENST00000417664 NOL4LQ96MY1 436 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-205ENST00000417664 GNB4Q9HAV0 340 aa13.01□□□□□ -0.33
SSBP3-205ENST00000417664 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
SSBP3-205ENST00000417664 ZNF253O75346 499 aa13□□□□□ -0.33
SSBP3-205ENST00000417664 IGLV2-8P01709 118 aa13□□□□□ -0.33
SSBP3-205ENST00000417664 ERVFC1-1P60608 527 aa13□□□□□ -0.33
SSBP3-205ENST00000417664 PSG9Q00887 426 aa13□□□□□ -0.33
SSBP3-205ENST00000417664 C1orf194Q5T5A4 169 aa13□□□□□ -0.33
SSBP3-205ENST00000417664 OR8I2Q8N0Y5 310 aa13□□□□□ -0.33
SSBP3-205ENST00000417664 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.99□□□□□ -0.33
SSBP3-205ENST00000417664 SNRPCP09234 159 aaKnown RBP12.99□□□□□ -0.33
SSBP3-205ENST00000417664 SIGLEC15Q6ZMC9 328 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 PRSS22Q9GZN4 317 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 AAMDCQ9H7C9 122 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 BIN3Q9NQY0 253 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 HELZ2Q9BYK8 2649 aaKnown RBP12.99□□□□□ -0.33
SSBP3-205ENST00000417664 CELSR1Q9NYQ6 3014 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 TRBV6-1A0A0K0K1D8 114 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 SERTM2A0A1B0GWG4 89 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 IGHG4P01861 327 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 PF4V1P10720 104 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 HNF1AP20823 631 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 GNG5P63218 68 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 Q6ZS46 218 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 METTL26Q96S19 204 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 SRD5A3Q9H8P0 318 aa12.99□□□□□ -0.33
SSBP3-205ENST00000417664 PPP5D1E7EU14 171 aa12.98□□□□□ -0.33
SSBP3-205ENST00000417664 K7EQM0 130 aa12.98□□□□□ -0.33
SSBP3-205ENST00000417664 BUB3O43684 328 aa12.98□□□□□ -0.33
SSBP3-205ENST00000417664 TYMSP04818 313 aa12.98□□□□□ -0.33
SSBP3-205ENST00000417664 ARL3P36405 182 aa12.98□□□□□ -0.33
SSBP3-205ENST00000417664 FAM231DQ6ZW35 169 aa12.98□□□□□ -0.33
SSBP3-205ENST00000417664 NPFFR1Q9GZQ6 430 aa12.98□□□□□ -0.33
SSBP3-205ENST00000417664 IL36BQ9NZH7 164 aa12.98□□□□□ -0.33
SSBP3-205ENST00000417664 H3BTX0 84 aa12.97□□□□□ -0.33
SSBP3-205ENST00000417664 NDUFA4O00483 81 aa12.97□□□□□ -0.33
SSBP3-205ENST00000417664 MEOX2P50222 304 aa12.97□□□□□ -0.33
SSBP3-205ENST00000417664 FAM3BP58499 235 aaPredicted RBP12.97□□□□□ -0.33
SSBP3-205ENST00000417664 TMEM86BQ8N661 226 aa12.97□□□□□ -0.33
SSBP3-205ENST00000417664 CSMD1Q96PZ7 3565 aa12.97□□□□□ -0.33
SSBP3-205ENST00000417664 A0A087X0K7 114 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 TRAV34A0A0B4J273 112 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 A0A1W2PPQ1 181 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 CLPSL1A2RUU4 121 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 LTAP01374 205 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 MGST1P10620 155 aaKnown RBP12.96□□□□□ -0.33
SSBP3-205ENST00000417664 OR5I1Q13606 314 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 IBA57Q5T440 356 aaKnown RBP12.96□□□□□ -0.33
SSBP3-205ENST00000417664 EXOC3-AS1Q8N2X6 119 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 C17orf77Q96MU5 243 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 U3KQE9 123 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 V9GYV3 84 aa12.96□□□□□ -0.33
SSBP3-205ENST00000417664 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.34
SSBP3-205ENST00000417664 PSMB8P28062 276 aa12.96□□□□□ -0.34
SSBP3-205ENST00000417664 CSN1S1P47710 185 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms