RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 Q6ZRG5 221 aa13.27□□□□□ -0.29
SEMA3B-201ENST00000416295 CHAC2Q8WUX2 184 aa13.27□□□□□ -0.29
SEMA3B-201ENST00000416295 UHRF2Q96PU4 802 aa13.27□□□□□ -0.29
SEMA3B-201ENST00000416295 ISLRO14498 428 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 RPL29P47914 159 aaKnown RBP13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 PRR20EP86478 221 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 PRR20CP86479 221 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 PRR20DP86480 221 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 PRR20BP86481 221 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 PRR20AP86496 221 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 OPCMLQ14982 345 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 OXA1LQ15070 435 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 FCN2Q15485 313 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 PATE2Q6UY27 113 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 OR11H7Q8NGC8 314 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 RSG1Q9BU20 258 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 MBD2Q9UBB5 411 aa13.26□□□□□ -0.29
SEMA3B-201ENST00000416295 KNCNA6PVL3 124 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 SOCS3O14543 225 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 SPRY2O43597 315 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 ATF4P18848 351 aaPredicted RBP13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 DEFB135Q30KP9 77 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 ACTL10Q5JWF8 245 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 MIC13Q5XKP0 118 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 LINC00305Q7Z4B0 112 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 TRPT1Q86TN4 253 aaKnown RBP13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 OR1L4Q8NGR5 311 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 THAP6Q8TBB0 222 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 ASB13Q8WXK3 278 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 PFDN5Q99471 154 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 OVOL2Q9BRP0 275 aa13.25□□□□□ -0.29
SEMA3B-201ENST00000416295 RPL12P30050 165 aaKnown RBP13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 B2MP61769 119 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 CLINT1Q14677 625 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 C10orf113Q5VZT2 155 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 MORN3Q6PF18 240 aaPredicted RBP13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 C16orf92Q96LL3 132 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 LINC00052Q96N35 136 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 EDA2RQ9HAV5 297 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 DNAJC4Q9NNZ3 241 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 SLC39A9Q9NUM3 307 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 HSPB11Q9Y547 144 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 PXMP4Q9Y6I8 212 aa13.24□□□□□ -0.29
SEMA3B-201ENST00000416295 CA1P00915 261 aaPredicted RBP13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 SPP1P10451 314 aa13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 LYL1P12980 280 aa13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 RNF183Q96D59 192 aa13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 ATP5SQ99766 215 aa13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 NPCDR1Q9BY65 106 aa13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 KCNIP2Q9NS61 270 aa13.23□□□□□ -0.29
SEMA3B-201ENST00000416295 GIPP09681 153 aaPredicted RBP13.22□□□□□ -0.29
SEMA3B-201ENST00000416295 FGL1Q08830 312 aa13.22□□□□□ -0.29
SEMA3B-201ENST00000416295 TMEM41BQ5BJD5 291 aa13.22□□□□□ -0.29
SEMA3B-201ENST00000416295 ZNF709Q8N972 641 aa13.22□□□□□ -0.29
SEMA3B-201ENST00000416295 GATAD1Q8WUU5 269 aa13.22□□□□□ -0.29
SEMA3B-201ENST00000416295 HUWE1Q7Z6Z7 4374 aaKnown RBP13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 A0A087X0K7 114 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 HLA-DRB4P13762 266 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 NUTF2P61970 127 aaKnown RBP13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 FOXI2Q6ZQN5 318 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 MUC7Q8TAX7 377 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 C17orf77Q96MU5 243 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 WDR61Q9GZS3 305 aaKnown RBP13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 RPRMQ9NS64 109 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 HLA-DRB4X5D2U9 266 aa13.21□□□□□ -0.29
SEMA3B-201ENST00000416295 H3BMM0 161 aa13.2□□□□□ -0.3
SEMA3B-201ENST00000416295 SAV1Q9H4B6 383 aaPredicted RBP13.2□□□□□ -0.3
SEMA3B-201ENST00000416295 C17orf112F2Z3M2 114 aa13.19□□□□□ -0.3
SEMA3B-201ENST00000416295 IFNA5P01569 189 aa13.19□□□□□ -0.3
SEMA3B-201ENST00000416295 CXCL2P19875 107 aa13.19□□□□□ -0.3
SEMA3B-201ENST00000416295 EBLN2Q6P2I7 272 aa13.19□□□□□ -0.3
SEMA3B-201ENST00000416295 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
SEMA3B-201ENST00000416295 MRPS12O15235 138 aaKnown RBP13.18□□□□□ -0.3
SEMA3B-201ENST00000416295 MORN5Q5VZ52 161 aa13.18□□□□□ -0.3
SEMA3B-201ENST00000416295 LCN15Q6UWW0 184 aa13.18□□□□□ -0.3
SEMA3B-201ENST00000416295 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
SEMA3B-201ENST00000416295 C1QTNF4Q9BXJ3 329 aa13.18□□□□□ -0.3
SEMA3B-201ENST00000416295 SMIM3Q9BZL3 60 aa13.18□□□□□ -0.3
SEMA3B-201ENST00000416295 TRAV8-2A0A0B4J237 113 aa13.17□□□□□ -0.3
SEMA3B-201ENST00000416295 GDF5OSQ5U4N7 250 aa13.17□□□□□ -0.3
SEMA3B-201ENST00000416295 C20orf173Q96LM9 149 aa13.17□□□□□ -0.3
SEMA3B-201ENST00000416295 CLUHP3Q96NS8 147 aa13.17□□□□□ -0.3
SEMA3B-201ENST00000416295 GIG44P09565 113 aaPredicted RBP13.16□□□□□ -0.3
SEMA3B-201ENST00000416295 C4BPBP20851 252 aa13.16□□□□□ -0.3
SEMA3B-201ENST00000416295 IL17DQ8TAD2 202 aa13.16□□□□□ -0.3
SEMA3B-201ENST00000416295 AQP10Q96PS8 301 aa13.16□□□□□ -0.3
SEMA3B-201ENST00000416295 RARRES2Q99969 163 aa13.16□□□□□ -0.3
SEMA3B-201ENST00000416295 SLC50A1Q9BRV3 221 aa13.16□□□□□ -0.3
SEMA3B-201ENST00000416295 PARD6GQ9BYG4 376 aaPredicted RBP13.16□□□□□ -0.3
SEMA3B-201ENST00000416295 HRH4Q9H3N8 390 aa13.16□□□□□ -0.3
SEMA3B-201ENST00000416295 A0A0J9YX75 114 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 IGLC2P0DOY2 106 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 DEFB1P60022 68 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 GUK1Q16774 197 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 CASC10Q5T4H9 136 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 IGFL4Q6B9Z1 124 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms