RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 RPL12P30050 165 aaKnown RBP5.7□□□□□ -1.5
CPSF4-202ENST00000412686 RAP2BP61225 183 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 SELENOTP62341 195 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 ATP6V1FQ16864 119 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 GCSAMLQ5JQS6 135 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 PSMG4Q5JS54 123 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 SHANK2-AS3Q9BTD1 123 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 NPCDR1Q9BY65 106 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 WDR61Q9GZS3 305 aaKnown RBP5.7□□□□□ -1.5
CPSF4-202ENST00000412686 NRN1Q9NPD7 142 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 SLC39A9Q9NUM3 307 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 RFNGQ9Y644 331 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 PXMP4Q9Y6I8 212 aa5.7□□□□□ -1.5
CPSF4-202ENST00000412686 TRAV5A0A0B4J249 113 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 COX7A2P2O60397 106 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 NUP62P37198 522 aaPredicted RBP5.69□□□□□ -1.5
CPSF4-202ENST00000412686 AP2S1P53680 142 aaPredicted RBP5.69□□□□□ -1.5
CPSF4-202ENST00000412686 B2MP61769 119 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 FGL1Q08830 312 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 C1orf194Q5T5A4 169 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 IGFL4Q6B9Z1 124 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 LINC00305Q7Z4B0 112 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 OR2T35Q8NGX2 323 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 RCHY1Q96PM5 261 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 ATP5SQ99766 215 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 RSG1Q9BU20 258 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 FBXL17Q9UF56 701 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 U3KQK5 164 aa5.69□□□□□ -1.5
CPSF4-202ENST00000412686 FXYD6-FXYD2A0A087WZ82 144 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 TRAV8-2A0A0B4J237 113 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 RNF222A6NCQ9 220 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 H3BTX0 84 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 MRPS12O15235 138 aaKnown RBP5.68□□□□□ -1.5
CPSF4-202ENST00000412686 EIF3GO75821 320 aaKnown RBP eCLIP5.68□□□□□ -1.5
CPSF4-202ENST00000412686 NHLRC4P0CG21 123 aaPredicted RBP5.68□□□□□ -1.5
CPSF4-202ENST00000412686 HLA-DMBP28068 263 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 RPL29P47914 159 aaKnown RBP5.68□□□□□ -1.5
CPSF4-202ENST00000412686 RAB31Q13636 194 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 GDF5OSQ5U4N7 250 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 C10orf113Q5VZT2 155 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 SPATA31B1PQ5VZV4 182 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 Q6ZRG5 221 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 LINC00052Q96N35 136 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 PFDN2Q9UHV9 154 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 AGRNO00468 2067 aa5.68□□□□□ -1.5
CPSF4-202ENST00000412686 F6UB75 175 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 FAM229AH3BQW9 127 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 MPDU1O75352 247 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 RPL7P18124 248 aaKnown RBP5.67□□□□□ -1.5
CPSF4-202ENST00000412686 C4BPBP20851 252 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 GALR1P47211 349 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 DEFB135Q30KP9 77 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 PXDC1Q5TGL8 231 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 RNF182Q8N6D2 247 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 C16orf92Q96LL3 132 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 AQP10Q96PS8 301 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 SPATA25Q9BR10 227 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 ZMAT4Q9H898 229 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 DNAJC4Q9NNZ3 241 aa5.67□□□□□ -1.5
CPSF4-202ENST00000412686 hCG_2014768A0A024R1R8 64 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 H3BQ15 152 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 SLC17A3O00476 420 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ARPC5O15511 151 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 IGKV3-20P01619 116 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ZNF705DP0CH99 300 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ZNF705BP0CI00 300 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ATF4P18848 351 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 PSMB3P49720 205 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 APOC4P55056 127 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 CMC4P56277 68 aaPredicted RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 FAM78BQ5VT40 261 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 Q6ZNX1 250 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 MIR17HGQ75NE6 70 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 TRPT1Q86TN4 253 aaKnown RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 STHQ8IWL8 128 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 OR11H4Q8NGC9 324 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 OR1L4Q8NGR5 311 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 SCGB1C1Q8TD33 95 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 ASB13Q8WXK3 278 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 PFDN5Q99471 154 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 OVOL2Q9BRP0 275 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 SEPSECSQ9HD40 501 aaKnown RBP5.66□□□□□ -1.5
CPSF4-202ENST00000412686 TNFSF18Q9UNG2 199 aa5.66□□□□□ -1.5
CPSF4-202ENST00000412686 A0A087X0K7 114 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 H3BMM0 161 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 ISLRO14498 428 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 CA1P00915 261 aaPredicted RBP5.65□□□□□ -1.5
CPSF4-202ENST00000412686 IFNA5P01569 189 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 GIG44P09565 113 aaPredicted RBP5.65□□□□□ -1.5
CPSF4-202ENST00000412686 IGLC2P0DOY2 106 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 PYYP10082 97 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 S100A7P31151 101 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 FXYD7P58549 80 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 FFAR4Q5NUL3 377 aa5.65□□□□□ -1.5
CPSF4-202ENST00000412686 ZNF709Q8N972 641 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms