RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 RFNGQ9Y644 331 aa8.81□□□□□ -1
NEDD1-202ENST00000411739 H3BTX0 84 aa8.81□□□□□ -1
NEDD1-202ENST00000411739 GALR1P47211 349 aa8.81□□□□□ -1
NEDD1-202ENST00000411739 GDF5OSQ5U4N7 250 aa8.81□□□□□ -1
NEDD1-202ENST00000411739 STHQ8IWL8 128 aa8.81□□□□□ -1
NEDD1-202ENST00000411739 C20orf173Q96LM9 149 aa8.81□□□□□ -1
NEDD1-202ENST00000411739 OVOL2Q9BRP0 275 aa8.81□□□□□ -1
NEDD1-202ENST00000411739 PXMP4Q9Y6I8 212 aa8.81□□□□□ -1
NEDD1-202ENST00000411739 SOCS3O14543 225 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 IGKV3-20P01619 116 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 PET100P0DJ07 73 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 APOC4P55056 127 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 B2MP61769 119 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 SNRPD3P62318 126 aaKnown RBP8.8□□□□□ -1
NEDD1-202ENST00000411739 PRR20EP86478 221 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 PRR20CP86479 221 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 PRR20DP86480 221 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 PRR20BP86481 221 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 PRR20AP86496 221 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 C10orf113Q5VZT2 155 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 C16orf92Q96LL3 132 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 NPCDR1Q9BY65 106 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 WFDC1Q9HC57 220 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 HSPB11Q9Y547 144 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 F6UB75 175 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 OPCMLQ14982 345 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 Q6ZRG5 221 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 RNF182Q8N6D2 247 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 WWC2-AS2Q96NR7 200 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 CSTL1Q9H114 145 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 SLC39A9Q9NUM3 307 aa8.8□□□□□ -1
NEDD1-202ENST00000411739 HLA-DMBP28068 263 aa8.79□□□□□ -1
NEDD1-202ENST00000411739 DNAJC4Q9NNZ3 241 aa8.79□□□□□ -1
NEDD1-202ENST00000411739 CA1P00915 261 aaPredicted RBP8.79□□□□□ -1
NEDD1-202ENST00000411739 ATF4P18848 351 aaPredicted RBP8.79□□□□□ -1
NEDD1-202ENST00000411739 RPL29P47914 159 aaKnown RBP8.79□□□□□ -1
NEDD1-202ENST00000411739 CHAC2Q8WUX2 184 aa8.79□□□□□ -1
NEDD1-202ENST00000411739 WDR61Q9GZS3 305 aaKnown RBP8.79□□□□□ -1
NEDD1-202ENST00000411739 SMLR1H3BR10 107 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 LYL1P12980 280 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 ID1P41134 155 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 TRPT1Q86TN4 253 aaKnown RBP8.78□□□□□ -1
NEDD1-202ENST00000411739 ATP5SQ99766 215 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 CLEC5AQ9NY25 188 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 TRAV8-2A0A0B4J237 113 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 SPRY2O43597 315 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 EIF3GO75821 320 aaKnown RBP eCLIP8.78□□□□□ -1
NEDD1-202ENST00000411739 GIPP09681 153 aaPredicted RBP8.78□□□□□ -1
NEDD1-202ENST00000411739 ZNF705DP0CH99 300 aaPredicted RBP8.78□□□□□ -1
NEDD1-202ENST00000411739 ZNF705BP0CI00 300 aaPredicted RBP8.78□□□□□ -1
NEDD1-202ENST00000411739 RPL7P18124 248 aaKnown RBP8.78□□□□□ -1
NEDD1-202ENST00000411739 FXYD7P58549 80 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 SPATA31B1PQ5VZV4 182 aa8.78□□□□□ -1
NEDD1-202ENST00000411739 KIR2DL5BA0A0G2JN68 375 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 KIR2DL5BA0A0G2JPC4 375 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 MRPS12O15235 138 aaKnown RBP8.77□□□□□ -1.01
NEDD1-202ENST00000411739 GIG44P09565 113 aaPredicted RBP8.77□□□□□ -1.01
NEDD1-202ENST00000411739 PXDC1Q5TGL8 231 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 KIR2DL5AQ8N109 375 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 OR2T35Q8NGX2 323 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 KIR2DL5BQ8NHK3 375 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 ELOA3CA0A087WX78 387 aaPredicted RBP8.77□□□□□ -1.01
NEDD1-202ENST00000411739 FXYD6-FXYD2A0A087WZ82 144 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 C4BPBP20851 252 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 PSMB3P49720 205 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 OR4B1Q8NGF8 309 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 GPR82Q96P67 336 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 EDA2RQ9HAV5 297 aa8.77□□□□□ -1.01
NEDD1-202ENST00000411739 H3BMM0 161 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 H3BQ15 152 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 ISLRO14498 428 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 S100A7P31151 101 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 Q6ZWC4 215 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 ZNF709Q8N972 641 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 OR1L4Q8NGR5 311 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 LRRC20Q8TCA0 184 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 RNF183Q96D59 192 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 UBE2CO00762 179 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 MPDU1O75352 247 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 SCGB1C1Q8TD33 95 aa8.76□□□□□ -1.01
NEDD1-202ENST00000411739 SEPSECSQ9HD40 501 aaKnown RBP8.76□□□□□ -1.01
NEDD1-202ENST00000411739 G3V3Q6 166 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 SLC17A3O00476 420 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 IFNA5P01569 189 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 FAM78BQ5VT40 261 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 MIR17HGQ75NE6 70 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 BPIFA4PQ86YQ2 179 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 DEFB4AO15263 64 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 PYYP10082 97 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 HLA-DRB4P13762 266 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 MEOX2P50222 304 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 ZFAND6Q6FIF0 208 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 S100A7AQ86SG5 101 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 PFDN5Q99471 154 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 SAV1Q9H4B6 383 aaPredicted RBP8.75□□□□□ -1.01
NEDD1-202ENST00000411739 XCL2Q9UBD3 114 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 HLA-DRB4X5D2U9 266 aa8.75□□□□□ -1.01
NEDD1-202ENST00000411739 ZNF705FA8MVS1 300 aaPredicted RBP8.74□□□□□ -1.01
NEDD1-202ENST00000411739 FFAR4Q5NUL3 377 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms