RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 PSMB3P49720 205 aa11.98□□□□□ -0.49
NOD1-202ENST00000411552 MIC13Q5XKP0 118 aa11.98□□□□□ -0.49
NOD1-202ENST00000411552 OR5C1Q8NGR4 320 aa11.98□□□□□ -0.49
NOD1-202ENST00000411552 MUC7Q8TAX7 377 aa11.98□□□□□ -0.49
NOD1-202ENST00000411552 RNF183Q96D59 192 aa11.98□□□□□ -0.49
NOD1-202ENST00000411552 ARV1Q9H2C2 271 aa11.98□□□□□ -0.49
NOD1-202ENST00000411552 ISLRO14498 428 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 COX7A2P2O60397 106 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 CA1P00915 261 aaPredicted RBP11.97□□□□□ -0.49
NOD1-202ENST00000411552 MEOX2P50222 304 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 PRR20EP86478 221 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 PRR20CP86479 221 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 PRR20DP86480 221 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 PRR20BP86481 221 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 PRR20AP86496 221 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 RGS21Q2M5E4 152 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 S100A7AQ86SG5 101 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 LINC00052Q96N35 136 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 MED28Q9H204 178 aa11.97□□□□□ -0.49
NOD1-202ENST00000411552 RPL7P18124 248 aaKnown RBP11.96□□□□□ -0.49
NOD1-202ENST00000411552 DEFB1P60022 68 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 CLINT1Q14677 625 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 OPCMLQ14982 345 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 FCN2Q15485 313 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 SAMD13Q5VXD3 122 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 LINC00305Q7Z4B0 112 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 OR11H7Q8NGC8 314 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 CHAC2Q8WUX2 184 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 TMEM37Q8WXS4 190 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 MBD2Q9UBB5 411 aa11.96□□□□□ -0.49
NOD1-202ENST00000411552 ELOA3CA0A087WX78 387 aaPredicted RBP11.95□□□□□ -0.5
NOD1-202ENST00000411552 GIG44P09565 113 aaPredicted RBP11.95□□□□□ -0.5
NOD1-202ENST00000411552 ATF4P18848 351 aaPredicted RBP11.95□□□□□ -0.5
NOD1-202ENST00000411552 RPL29P47914 159 aaKnown RBP11.95□□□□□ -0.5
NOD1-202ENST00000411552 C10orf113Q5VZT2 155 aa11.95□□□□□ -0.5
NOD1-202ENST00000411552 Q6ZRG5 221 aa11.95□□□□□ -0.5
NOD1-202ENST00000411552 THAP6Q8TBB0 222 aa11.95□□□□□ -0.5
NOD1-202ENST00000411552 C16orf92Q96LL3 132 aa11.95□□□□□ -0.5
NOD1-202ENST00000411552 C20orf173Q96LM9 149 aa11.95□□□□□ -0.5
NOD1-202ENST00000411552 DNAJC4Q9NNZ3 241 aa11.95□□□□□ -0.5
NOD1-202ENST00000411552 SLC39A9Q9NUM3 307 aa11.95□□□□□ -0.5
NOD1-202ENST00000411552 H3BMM0 161 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 C3orf84H3BNL1 204 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 MPDU1O75352 247 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 SPP1P10451 314 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 C4BPBP20851 252 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 B2MP61769 119 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 GDF5OSQ5U4N7 250 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 MORN5Q5VZ52 161 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 MORN3Q6PF18 240 aaPredicted RBP11.94□□□□□ -0.5
NOD1-202ENST00000411552 GATAD1Q8WUU5 269 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 NPCDR1Q9BY65 106 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 RNF24Q9Y225 148 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 HSPB11Q9Y547 144 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 PXMP4Q9Y6I8 212 aa11.94□□□□□ -0.5
NOD1-202ENST00000411552 A0A087X0K7 114 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 MRPS12O15235 138 aaKnown RBP11.93□□□□□ -0.5
NOD1-202ENST00000411552 LYL1P12980 280 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 HLA-DRB4P13762 266 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 RPL12P30050 165 aaKnown RBP11.93□□□□□ -0.5
NOD1-202ENST00000411552 FGL1Q08830 312 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 OXA1LQ15070 435 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 IGFL4Q6B9Z1 124 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 FOXI2Q6ZQN5 318 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 SAV1Q9H4B6 383 aaPredicted RBP11.93□□□□□ -0.5
NOD1-202ENST00000411552 HLA-DRB4X5D2U9 266 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 CSMD3Q7Z407 3707 aa11.93□□□□□ -0.5
NOD1-202ENST00000411552 TRAV8-2A0A0B4J237 113 aa11.92□□□□□ -0.5
NOD1-202ENST00000411552 OR1L4Q8NGR5 311 aa11.92□□□□□ -0.5
NOD1-202ENST00000411552 PFDN5Q99471 154 aa11.92□□□□□ -0.5
NOD1-202ENST00000411552 ATP5SQ99766 215 aa11.92□□□□□ -0.5
NOD1-202ENST00000411552 RPRMQ9NS64 109 aa11.92□□□□□ -0.5
NOD1-202ENST00000411552 A0A0J9YWU9 116 aa11.91□□□□□ -0.5
NOD1-202ENST00000411552 F6UB75 175 aa11.91□□□□□ -0.5
NOD1-202ENST00000411552 TMEM41BQ5BJD5 291 aa11.91□□□□□ -0.5
NOD1-202ENST00000411552 CASC10Q5T4H9 136 aa11.91□□□□□ -0.5
NOD1-202ENST00000411552 RNF182Q8N6D2 247 aa11.91□□□□□ -0.5
NOD1-202ENST00000411552 OR11H2Q8NH07 326 aa11.91□□□□□ -0.5
NOD1-202ENST00000411552 RARRES2Q99969 163 aa11.91□□□□□ -0.5
NOD1-202ENST00000411552 SMIM3Q9BZL3 60 aa11.91□□□□□ -0.5
NOD1-202ENST00000411552 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
NOD1-202ENST00000411552 STARD9Q9P2P6 4700 aa11.9□□□□□ -0.5
NOD1-202ENST00000411552 KMT2CQ8NEZ4 4911 aaKnown RBP11.9□□□□□ -0.5
NOD1-202ENST00000411552 TRAV5A0A0B4J249 113 aa11.9□□□□□ -0.5
NOD1-202ENST00000411552 IGKV3-20P01619 116 aa11.9□□□□□ -0.5
NOD1-202ENST00000411552 GCSAMLQ5JQS6 135 aa11.9□□□□□ -0.5
NOD1-202ENST00000411552 ZFAND6Q6FIF0 208 aa11.9□□□□□ -0.5
NOD1-202ENST00000411552 BPIFA4PQ86YQ2 179 aa11.9□□□□□ -0.5
NOD1-202ENST00000411552 CLEC5AQ9NY25 188 aa11.9□□□□□ -0.5
NOD1-202ENST00000411552 A0A0J9YX75 114 aa11.89□□□□□ -0.51
NOD1-202ENST00000411552 SNRPCP09234 159 aaKnown RBP11.89□□□□□ -0.51
NOD1-202ENST00000411552 GIPP09681 153 aaPredicted RBP11.89□□□□□ -0.51
NOD1-202ENST00000411552 NUTF2P61970 127 aaKnown RBP11.89□□□□□ -0.51
NOD1-202ENST00000411552 SPATA31B1PQ5VZV4 182 aa11.89□□□□□ -0.51
NOD1-202ENST00000411552 EBLN2Q6P2I7 272 aa11.89□□□□□ -0.51
NOD1-202ENST00000411552 ZNF709Q8N972 641 aa11.89□□□□□ -0.51
NOD1-202ENST00000411552 CSNK1G2-AS1Q8NCQ2 148 aa11.89□□□□□ -0.51
NOD1-202ENST00000411552 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
NOD1-202ENST00000411552 TENM2Q9NT68 2774 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms