RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 NAV2Q8IVL1 2488 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 CSMD1Q96PZ7 3565 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 WI2-2373I1.2A0A1W2PRP0 233 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 SMAD7O15105 426 aaKnown RBP4.3□□□□□ -1.72
EPHA4-202ENST00000409854 COX7A2P2O60397 106 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 RD3LP0DJH9 198 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 C8orf88P0DMB2 117 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 PSG1P11464 419 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 BLCAPP62952 87 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 MEF2BQ02080 365 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-202ENST00000409854 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 PQLC2Q6ZP29 291 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM160Q9NX00 188 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 ZANQ9Y493 2812 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 FAM223BA6NKX1 122 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 PPP1R2P9O14990 202 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 OR2C1O95371 312 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 IGLV1-40P01703 118 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 TAS2R45P59539 299 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 RHOGP84095 191 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 UBE2V1Q13404 147 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 FAM90A2PQ658T7 463 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 Q6ZS46 218 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 FAM223AQ8IWN6 122 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM86BQ8N661 226 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 TXNDC17Q9BRA2 123 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 C20orf24Q9BUV8 137 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 PGPEP1Q9NXJ5 209 aa4.3□□□□□ -1.72
EPHA4-202ENST00000409854 MRPL27Q9P0M9 148 aaKnown RBP4.3□□□□□ -1.72
EPHA4-202ENST00000409854 TGIF2-C20orf24A0A0A6YYL0 155 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM250H0YL14 139 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 GNG7O60262 68 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 CTSGP08311 255 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 C15orf32Q32M92 178 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 OR51G1Q8NGK1 321 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 CCDC140Q96MF4 163 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 UNC79Q9P2D8 2635 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 HOXA3O43365 443 aaPredicted RBP4.29□□□□□ -1.72
EPHA4-202ENST00000409854 WIPF1O43516 503 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 PAGE4O60829 102 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 HYPMO75409 117 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 PTTG1IPP53801 180 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 LINC00305Q7Z4B0 112 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 Q8N2B8 174 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF491Q8N8L2 437 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 CYB561D1Q8N8Q1 229 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM167BQ9NRX6 74 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF355PQ9NSJ1 428 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 TNFRSF18Q9Y5U5 241 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM89A2RUT3 159 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 SCGB2A1O75556 95 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 ADMP35318 185 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 RHEBQ15382 184 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 Q56UQ5 140 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 OR1B1Q8NGR6 318 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 GLMPQ8WWB7 406 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 EEF1AKMT3Q96AZ1 226 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 UHRF2Q96PU4 802 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 ATG101Q9BSB4 218 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 TPPP3Q9BW30 176 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF702PQ9H963 129 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 SPANXA1Q9NS26 97 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 DOK5Q9P104 306 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 HIGD1AQ9Y241 93 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 S4R3C0 116 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 TEX15Q9BXT5 2789 aa4.29□□□□□ -1.72
EPHA4-202ENST00000409854 TRAV5A0A0B4J249 113 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 KIR2DL5BA0A0G2JN68 375 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 KIR2DL5BA0A0G2JPC4 375 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 H3BRN7 92 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 GP9P14770 177 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 ORM2P19652 201 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 SOHLH1Q5JUK2 328 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 ZNF343Q6P1L6 599 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 KIR2DL5AQ8N109 375 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 SIGLECL1Q8N7X8 197 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 STXBP6Q8NFX7 210 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 OR5AU1Q8NGC0 362 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 RPUSD4Q96CM3 377 aaKnown RBP4.28□□□□□ -1.72
EPHA4-202ENST00000409854 RNF125Q96EQ8 232 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 TMEM14CQ9P0S9 112 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 YTHDF2Q9Y5A9 579 aaKnown RBP4.28□□□□□ -1.72
EPHA4-202ENST00000409854 OR2T8A6NH00 312 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 C11orf94C9JXX5 98 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 F6UZH7 168 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 M0R036 132 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 PDE6DO43924 150 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 SCGB1D1O95968 90 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 ATP5G3P48201 142 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 LYZP61626 148 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 IL17RELQ6ZVW7 336 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 OR10D4PQ8NGN7 298 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 C11orf52Q96A22 123 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 FXYD5Q96DB9 178 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 USMG5Q96IX5 58 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 SHANK2-AS3Q9BTD1 123 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 CHRDL1Q9BU40 450 aa4.28□□□□□ -1.72
EPHA4-202ENST00000409854 SLC25A39Q9BZJ4 359 aaPredicted RBP4.28□□□□□ -1.72
EPHA4-202ENST00000409854 LINC00527Q9UJ94 153 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms