RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 SCRT1Q9BWW7 348 aa13.54□□□□□ -0.24
PAX3-208ENST00000409828 SLC25A32Q9H2D1 315 aa13.54□□□□□ -0.24
PAX3-208ENST00000409828 BORCS7-ASMTA0A0B4J1R7 106 aa13.53□□□□□ -0.24
PAX3-208ENST00000409828 A0A0D9SG52 128 aa13.53□□□□□ -0.24
PAX3-208ENST00000409828 OR11H12B2RN74 326 aa13.53□□□□□ -0.24
PAX3-208ENST00000409828 JTBO76095 146 aa13.53□□□□□ -0.24
PAX3-208ENST00000409828 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
PAX3-208ENST00000409828 RSG1Q9BU20 258 aa13.53□□□□□ -0.24
PAX3-208ENST00000409828 SLC25A22Q9H936 323 aa13.53□□□□□ -0.24
PAX3-208ENST00000409828 IGKV3-7A0A075B6H7 116 aa13.52□□□□□ -0.25
PAX3-208ENST00000409828 ODF3L2Q3SX64 289 aa13.52□□□□□ -0.25
PAX3-208ENST00000409828 GBGT1Q8N5D6 347 aa13.52□□□□□ -0.25
PAX3-208ENST00000409828 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
PAX3-208ENST00000409828 PRKDCP78527 4128 aaKnown RBP13.52□□□□□ -0.25
PAX3-208ENST00000409828 hCG_2014768A0A024R1R8 64 aa13.51□□□□□ -0.25
PAX3-208ENST00000409828 C1QBP02746 253 aa13.51□□□□□ -0.25
PAX3-208ENST00000409828 IGHV4-30-4P0DP06 118 aa13.51□□□□□ -0.25
PAX3-208ENST00000409828 SERF2P84101 59 aa13.51□□□□□ -0.25
PAX3-208ENST00000409828 DEFB121Q5J5C9 76 aa13.51□□□□□ -0.25
PAX3-208ENST00000409828 BPIFA4PQ86YQ2 179 aa13.51□□□□□ -0.25
PAX3-208ENST00000409828 GNPNAT1Q96EK6 184 aaPredicted RBP13.51□□□□□ -0.25
PAX3-208ENST00000409828 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
PAX3-208ENST00000409828 A0A087X0K7 114 aa13.5□□□□□ -0.25
PAX3-208ENST00000409828 MRPS12O15235 138 aaKnown RBP13.5□□□□□ -0.25
PAX3-208ENST00000409828 TFPI2P48307 235 aa13.5□□□□□ -0.25
PAX3-208ENST00000409828 LEMD1Q68G75 181 aa13.5□□□□□ -0.25
PAX3-208ENST00000409828 HYLS1Q96M11 299 aa13.5□□□□□ -0.25
PAX3-208ENST00000409828 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
PAX3-208ENST00000409828 A0A1B0GVG6 124 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 ISLRO14498 428 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 SOCS3O14543 225 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 CXCL2P19875 107 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 ATP6V0CP27449 155 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 ID1P41134 155 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 PSMB3P49720 205 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 SNRPD3P62318 126 aaKnown RBP13.49□□□□□ -0.25
PAX3-208ENST00000409828 FFAR4Q5NUL3 377 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 FAM78BQ5VT40 261 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 RPL7L1Q6DKI1 246 aaKnown RBP13.49□□□□□ -0.25
PAX3-208ENST00000409828 WFDC3Q8IUB2 231 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 ARPC5LQ9BPX5 153 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 CYTL1Q9NRR1 136 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 TMEM14CQ9P0S9 112 aa13.49□□□□□ -0.25
PAX3-208ENST00000409828 MBP02144 154 aa13.48□□□□□ -0.25
PAX3-208ENST00000409828 ATF4P18848 351 aaPredicted RBP13.48□□□□□ -0.25
PAX3-208ENST00000409828 M6PRP20645 277 aa13.48□□□□□ -0.25
PAX3-208ENST00000409828 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
PAX3-208ENST00000409828 GCSAMLQ5JQS6 135 aa13.48□□□□□ -0.25
PAX3-208ENST00000409828 LINC00322Q6ZN03 302 aaPredicted RBP13.48□□□□□ -0.25
PAX3-208ENST00000409828 HSD17B11Q8NBQ5 300 aa13.48□□□□□ -0.25
PAX3-208ENST00000409828 C17orf77Q96MU5 243 aa13.48□□□□□ -0.25
PAX3-208ENST00000409828 B9D2Q9BPU9 175 aa13.48□□□□□ -0.25
PAX3-208ENST00000409828 TUBA4BQ9H853 241 aa13.48□□□□□ -0.25
PAX3-208ENST00000409828 FUT9Q9Y231 359 aa13.48□□□□□ -0.25
PAX3-208ENST00000409828 RHOBP62745 196 aa13.47□□□□□ -0.25
PAX3-208ENST00000409828 GUK1Q16774 197 aa13.47□□□□□ -0.25
PAX3-208ENST00000409828 MORN5Q5VZ52 161 aa13.47□□□□□ -0.25
PAX3-208ENST00000409828 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.47□□□□□ -0.25
PAX3-208ENST00000409828 DEFB125Q8N687 156 aa13.47□□□□□ -0.25
PAX3-208ENST00000409828 HRH4Q9H3N8 390 aa13.47□□□□□ -0.25
PAX3-208ENST00000409828 KANTRA0A1W2PQU2 76 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 BCL2L11O43521 198 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 FRMD6-AS1P0C7T7 363 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 IGLC2P0DOY2 106 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 EIF5AP63241 154 aaKnown RBP13.46□□□□□ -0.25
PAX3-208ENST00000409828 LCN15Q6UWW0 184 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 FAM24BQ8N5W8 94 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 SRD5A3Q9H8P0 318 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 CLEC5AQ9NY25 188 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 UBQLN2Q9UHD9 624 aa13.46□□□□□ -0.25
PAX3-208ENST00000409828 ZNF253O75346 499 aa13.45□□□□□ -0.26
PAX3-208ENST00000409828 ZNF688P0C7X2 276 aa13.45□□□□□ -0.26
PAX3-208ENST00000409828 DEFB131AP59861 70 aa13.45□□□□□ -0.26
PAX3-208ENST00000409828 TMUB2Q71RG4 321 aa13.45□□□□□ -0.26
PAX3-208ENST00000409828 FAM167A-AS1Q96KT0 104 aa13.45□□□□□ -0.26
PAX3-208ENST00000409828 WFDC10AQ9H1F0 79 aa13.45□□□□□ -0.26
PAX3-208ENST00000409828 TRAV5A0A0B4J249 113 aa13.44□□□□□ -0.26
PAX3-208ENST00000409828 HIST1H1EP10412 219 aaKnown RBP13.44□□□□□ -0.26
PAX3-208ENST00000409828 TAS2R45P59539 299 aa13.44□□□□□ -0.26
PAX3-208ENST00000409828 C16orf92Q96LL3 132 aa13.44□□□□□ -0.26
PAX3-208ENST00000409828 CITED4Q96RK1 184 aa13.44□□□□□ -0.26
PAX3-208ENST00000409828 SLC50A1Q9BRV3 221 aa13.44□□□□□ -0.26
PAX3-208ENST00000409828 AGRNO00468 2067 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 LOC102724200A0A096LPH7 203 aaPredicted RBP13.43□□□□□ -0.26
PAX3-208ENST00000409828 SPP1P10451 314 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 PDE6HQ13956 83 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 LGALSLQ3ZCW2 172 aaPredicted RBP13.43□□□□□ -0.26
PAX3-208ENST00000409828 PSMG4Q5JS54 123 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 SPATA31B1PQ5VZV4 182 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 MIR17HGQ75NE6 70 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 OR10G4Q8NGN3 311 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 OR10G9Q8NGN4 311 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 OR10G7Q8NGN6 311 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 SLC25A2Q9BXI2 301 aa13.43□□□□□ -0.26
PAX3-208ENST00000409828 KIR2DL5BA0A0G2JN68 375 aa13.42□□□□□ -0.26
PAX3-208ENST00000409828 KIR2DL5BA0A0G2JPC4 375 aa13.42□□□□□ -0.26
PAX3-208ENST00000409828 A0A1W2PPV4 95 aa13.42□□□□□ -0.26
PAX3-208ENST00000409828 RBMY1BA6NDE4 496 aaKnown RBP13.42□□□□□ -0.26
PAX3-208ENST00000409828 RBMY1EA6NEQ0 496 aaKnown RBP13.42□□□□□ -0.26
PAX3-208ENST00000409828 PFDN1O60925 122 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms