RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RANP62826 216 aaKnown RBP9.57□□□□□ -0.88
CHMP3-204ENST00000409727 BPIFA4PQ86YQ2 179 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 JMJD8Q96S16 334 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 METTL26Q96S19 204 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 SCO2A0A1W2PP80 73 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 GGTLC3B5MD39 225 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 SUMO1P63165 101 aaKnown RBP9.57□□□□□ -0.88
CHMP3-204ENST00000409727 TCTEX1D4Q5JR98 221 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 C10orf91Q5T1B1 145 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 S100A7AQ86SG5 101 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 OR8I2Q8N0Y5 310 aa9.57□□□□□ -0.88
CHMP3-204ENST00000409727 CARHSP1Q9Y2V2 147 aaKnown RBP9.57□□□□□ -0.88
CHMP3-204ENST00000409727 TCF21O43680 179 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 CRLF1O75462 422 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 NPPCP23582 126 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 DEFB136Q30KP8 78 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 FAM209BQ5JX69 171 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 FAM90A2PQ658T7 463 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 ATRAIDQ6UW56 229 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 OR4F17Q8NGA8 305 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 LINC01006Q8NI28 216 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 SUN5Q8TC36 379 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 UBE2E2Q96LR5 201 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 C17orf77Q96MU5 243 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 ZNF586Q9NXT0 402 aa9.56□□□□□ -0.88
CHMP3-204ENST00000409727 NDUFA4O00483 81 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 PDE6DO43924 150 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 NDUFB4O95168 129 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 LGALS1P09382 135 aaKnown RBP9.55□□□□□ -0.88
CHMP3-204ENST00000409727 PRB4P10163 310 aaPredicted RBP9.55□□□□□ -0.88
CHMP3-204ENST00000409727 RPEL1Q2QD12 228 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 SVBPQ8N300 66 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 RNF152Q8N8N0 203 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 MYOZ3Q8TDC0 251 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 DERL1Q9BUN8 251 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 PARLQ9H300 379 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 TMEM14CQ9P0S9 112 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 FN1P02751 2386 aaKnown RBP9.55□□□□□ -0.88
CHMP3-204ENST00000409727 SETXQ7Z333 2677 aaKnown RBP9.55□□□□□ -0.88
CHMP3-204ENST00000409727 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 A0A087WW49 117 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 A0A1W2PRE2 83 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 ZNF727A8MUV8 499 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 M0R036 132 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 HIST1H1EP10412 219 aaKnown RBP9.55□□□□□ -0.88
CHMP3-204ENST00000409727 CRYBB3P26998 211 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 RPH3ALQ9UNE2 315 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 SELENOKQ9Y6D0 94 aa9.55□□□□□ -0.88
CHMP3-204ENST00000409727 A0A1W2PRX2 142 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 F6UZH7 168 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 BUB3O43684 328 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 IGLC2P0DOY2 106 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 TM4SF20Q53R12 229 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 EXOC3-AS1Q8N2X6 119 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 DUX3Q96PT4 197 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 SMIM7Q9BQ49 75 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 NIPSNAP3BQ9BS92 247 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 ELOVL1Q9BW60 279 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 C16orf95Q9H693 158 aa9.54□□□□□ -0.88
CHMP3-204ENST00000409727 PGPA6NDG6 321 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 SLC17A3O00476 420 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 MRPS12O15235 138 aaKnown RBP9.53□□□□□ -0.88
CHMP3-204ENST00000409727 CD28P10747 220 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 RPL7P18124 248 aaKnown RBP9.53□□□□□ -0.88
CHMP3-204ENST00000409727 EDN2P20800 178 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 S100A7P31151 101 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 GNG5P63218 68 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 TXNDC17Q9BRA2 123 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 Q9H3A6 140 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 ARL2-SNX15V9GYD0 113 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 F8P00451 2351 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 TRBV19A0A075B6N1 114 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 ZNF785A8K8V0 405 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 SLC25A5P05141 298 aaKnown RBP9.53□□□□□ -0.88
CHMP3-204ENST00000409727 ATF4P18848 351 aaPredicted RBP9.53□□□□□ -0.88
CHMP3-204ENST00000409727 AKR1C3P42330 323 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 FAM106AQ4KMX7 169 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 KLHL30-AS1Q8NEE0 82 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 SMAD5-AS1Q9Y6J3 95 aa9.53□□□□□ -0.88
CHMP3-204ENST00000409727 NSD1Q96L73 2696 aaPredicted RBP9.53□□□□□ -0.88
CHMP3-204ENST00000409727 NF1P21359 2839 aa9.52□□□□□ -0.88
CHMP3-204ENST00000409727 SNAPINO95295 136 aa9.52□□□□□ -0.89
CHMP3-204ENST00000409727 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
CHMP3-204ENST00000409727 SYNJ2BPP57105 145 aa9.52□□□□□ -0.89
CHMP3-204ENST00000409727 CLRN3Q8NCR9 226 aa9.52□□□□□ -0.89
CHMP3-204ENST00000409727 NKX6-2Q9C056 277 aaPredicted RBP9.52□□□□□ -0.89
CHMP3-204ENST00000409727 RNF114Q9Y508 228 aa9.52□□□□□ -0.89
CHMP3-204ENST00000409727 PGPEP1LA6NFU8 196 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 CDX1P47902 265 aaPredicted RBP9.51□□□□□ -0.89
CHMP3-204ENST00000409727 SLURP1P55000 103 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 AWAT1Q58HT5 328 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 IGFL4Q6B9Z1 124 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 C8orf86Q6ZUL3 223 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 GPHB5Q86YW7 130 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 OR11H1Q8NG94 326 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 C4orf3Q8WVX3 66 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 DAZ1Q9NQZ3 744 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms