RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IGF2BP2-AS1Q96M15 143 aa12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 A0A1W2PRE2 83 aa12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 GPX1P07203 203 aa12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 NBEAP1P0C6P0 100 aa12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 GPR6P46095 362 aaPredicted RBP12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 GNG5P63218 68 aa12.04□□□□□ -0.48
SCAMP4-202ENST00000409472 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 PRTN3P24158 256 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 OR1L4Q8NGR5 311 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 V9GYV3 84 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 I3L2K1 104 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 M0R1W7 72 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 NBR2O15453 112 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 CNIH1O95406 144 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 HES1Q14469 280 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 C16orf54Q6UWD8 224 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 ZNF329Q86UD4 541 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 BLNKQ8WV28 456 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 TRGV9Q99603 122 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 WNT10AQ9GZT5 417 aa12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 TBL2Q9Y4P3 447 aaKnown RBP12.03□□□□□ -0.48
SCAMP4-202ENST00000409472 CSMD2Q7Z408 3487 aa12.02□□□□□ -0.48
SCAMP4-202ENST00000409472 USP9XQ93008 2570 aaPredicted RBP12.02□□□□□ -0.48
SCAMP4-202ENST00000409472 ACACBO00763 2458 aa12.02□□□□□ -0.48
SCAMP4-202ENST00000409472 HOXB4P17483 251 aaPredicted RBP12.02□□□□□ -0.49
SCAMP4-202ENST00000409472 NDPQ00604 133 aa12.02□□□□□ -0.49
SCAMP4-202ENST00000409472 SGK494Q96LW2 274 aa12.02□□□□□ -0.49
SCAMP4-202ENST00000409472 IGLC1P0CG04 106 aa12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 CBLN1P23435 193 aa12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 PMCHL1Q16048 86 aa12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 TIGITQ495A1 244 aa12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 NIT1Q86X76 327 aa12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 NRN1Q9NPD7 142 aa12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 K7EIM0 57 aa12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 CA1P00915 261 aaPredicted RBP12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 PRB4P10163 310 aaPredicted RBP12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 IL36BQ9NZH7 164 aa12.01□□□□□ -0.49
SCAMP4-202ENST00000409472 SPINK4O60575 86 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 MGST1P10620 155 aaKnown RBP12□□□□□ -0.49
SCAMP4-202ENST00000409472 PSG1P11464 419 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 AMTP48728 403 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 SLC35B1P78383 322 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 LY96Q9Y6Y9 160 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 TRBV9A0A0B4J1U6 114 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 NDUFA3O95167 84 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 GP9P14770 177 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 TCL1AP56279 114 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 LYZP61626 148 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 KCNS1Q96KK3 526 aa12□□□□□ -0.49
SCAMP4-202ENST00000409472 ISLRO14498 428 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 IGKV1-17P01599 117 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 MYCNOSP40205 109 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 PAX2Q02962 417 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 OR8I2Q8N0Y5 310 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 PERPQ96FX8 193 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 BPESC1Q9GZL8 116 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 ZFYVE26Q68DK2 2539 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 PEX7O00628 323 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 OR10J3Q5JRS4 329 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 Q71RC1 249 aaPredicted RBP11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 NPBQ8NG41 125 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 RNF5Q99942 180 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 SIRPDQ9H106 197 aa11.99□□□□□ -0.49
SCAMP4-202ENST00000409472 CORTO00230 105 aa11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 CEACAM3P40198 252 aa11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 C5orf64Q2M2E5 130 aa11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 KIR3DL3Q8N743 410 aa11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 FAM168AQ92567 244 aa11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 RNF114Q9Y508 228 aa11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 PET117Q6UWS5 81 aa11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 BORCS7Q96B45 105 aa11.98□□□□□ -0.49
SCAMP4-202ENST00000409472 RPEL1Q2QD12 228 aa11.97□□□□□ -0.49
SCAMP4-202ENST00000409472 MEGF9Q9H1U4 602 aa11.97□□□□□ -0.49
SCAMP4-202ENST00000409472 SPG11Q96JI7 2443 aa11.97□□□□□ -0.49
SCAMP4-202ENST00000409472 NCBP2LA6PVI3 153 aaKnown RBP11.97□□□□□ -0.49
SCAMP4-202ENST00000409472 EFNA4P52798 201 aa11.97□□□□□ -0.49
SCAMP4-202ENST00000409472 CX3CL1P78423 397 aa11.97□□□□□ -0.49
SCAMP4-202ENST00000409472 FAM120AOSQ5T036 256 aa11.97□□□□□ -0.49
SCAMP4-202ENST00000409472 AJUBAQ96IF1 538 aa11.97□□□□□ -0.49
SCAMP4-202ENST00000409472 MT-ND6P03923 174 aa11.96□□□□□ -0.49
SCAMP4-202ENST00000409472 C3orf79P0CE67 100 aa11.96□□□□□ -0.49
SCAMP4-202ENST00000409472 IER3P46695 156 aa11.96□□□□□ -0.49
SCAMP4-202ENST00000409472 IBA57Q5T440 356 aaKnown RBP11.96□□□□□ -0.49
SCAMP4-202ENST00000409472 Q8N6K4 173 aa11.96□□□□□ -0.49
SCAMP4-202ENST00000409472 RASL11BQ9BPW5 248 aa11.96□□□□□ -0.49
SCAMP4-202ENST00000409472 PGPA6NDG6 321 aa11.96□□□□□ -0.5
SCAMP4-202ENST00000409472 F2Z2F3 143 aa11.96□□□□□ -0.5
SCAMP4-202ENST00000409472 ZNF324O75467 553 aaPredicted RBP11.96□□□□□ -0.5
SCAMP4-202ENST00000409472 PMCHP20382 165 aa11.96□□□□□ -0.5
SCAMP4-202ENST00000409472 LMO4P61968 165 aa11.96□□□□□ -0.5
SCAMP4-202ENST00000409472 FANCD2OSQ96PS1 177 aa11.96□□□□□ -0.5
SCAMP4-202ENST00000409472 GNB4Q9HAV0 340 aa11.96□□□□□ -0.5
SCAMP4-202ENST00000409472 HIGD1AQ9Y241 93 aa11.96□□□□□ -0.5
SCAMP4-202ENST00000409472 MYO18BQ8IUG5 2567 aa11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 TRAV9-2A0A087WT02 112 aa11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 GAGE12BA1L429 117 aa11.95□□□□□ -0.5
SCAMP4-202ENST00000409472 SNURFLB1AK76 121 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms