RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 HUWE1Q7Z6Z7 4374 aaKnown RBP15.06■□□□□ 0
PTCD3-202ENST00000409326 FXYD6-FXYD2A0A087WZ82 144 aa15.06■□□□□ 0
PTCD3-202ENST00000409326 C10orf113Q5VZT2 155 aa15.06■□□□□ 0
PTCD3-202ENST00000409326 Q6ZNX1 250 aa15.06■□□□□ 0
PTCD3-202ENST00000409326 LINC00305Q7Z4B0 112 aa15.06■□□□□ 0
PTCD3-202ENST00000409326 APRG1Q8IVJ8 170 aa15.06■□□□□ 0
PTCD3-202ENST00000409326 PARD6GQ9BYG4 376 aaPredicted RBP15.06■□□□□ 0
PTCD3-202ENST00000409326 WFDC1Q9HC57 220 aa15.06■□□□□ 0
PTCD3-202ENST00000409326 SEPSECSQ9HD40 501 aaKnown RBP15.06■□□□□ 0
PTCD3-202ENST00000409326 DNAJC4Q9NNZ3 241 aa15.06■□□□□ 0
PTCD3-202ENST00000409326 KCNIP2Q9NS61 270 aa15.06■□□□□ 0
PTCD3-202ENST00000409326 IFNA5P01569 189 aa15.05■□□□□ -0
PTCD3-202ENST00000409326 ZNF688P0C7X2 276 aa15.05■□□□□ -0
PTCD3-202ENST00000409326 NHLRC4P0CG21 123 aaPredicted RBP15.05■□□□□ -0
PTCD3-202ENST00000409326 RPL7P18124 248 aaKnown RBP15.05■□□□□ -0
PTCD3-202ENST00000409326 DEFB131AP59861 70 aa15.05■□□□□ -0
PTCD3-202ENST00000409326 ZNF709Q8N972 641 aa15.05■□□□□ -0
PTCD3-202ENST00000409326 INO80EQ8NBZ0 244 aaPredicted RBP15.05■□□□□ -0
PTCD3-202ENST00000409326 TNFSF18Q9UNG2 199 aa15.05■□□□□ -0
PTCD3-202ENST00000409326 AGRNO00468 2067 aa15.04■□□□□ -0
PTCD3-202ENST00000409326 RNF222A6NCQ9 220 aa15.04■□□□□ -0
PTCD3-202ENST00000409326 C17orf112F2Z3M2 114 aa15.04■□□□□ -0
PTCD3-202ENST00000409326 SNRPD3P62318 126 aaKnown RBP15.04■□□□□ -0
PTCD3-202ENST00000409326 ZNF124Q15973 351 aa15.04■□□□□ -0
PTCD3-202ENST00000409326 SCGB1C1Q8TD33 95 aa15.04■□□□□ -0
PTCD3-202ENST00000409326 LOC102724200A0A096LPH7 203 aaPredicted RBP15.03■□□□□ -0
PTCD3-202ENST00000409326 SOCS3O14543 225 aa15.03■□□□□ -0
PTCD3-202ENST00000409326 MEOX2P50222 304 aa15.03■□□□□ -0
PTCD3-202ENST00000409326 HAGHQ16775 308 aa15.03■□□□□ -0
PTCD3-202ENST00000409326 SAMD13Q5VXD3 122 aa15.03■□□□□ -0
PTCD3-202ENST00000409326 GATAD1Q8WUU5 269 aa15.03■□□□□ -0
PTCD3-202ENST00000409326 RSG1Q9BU20 258 aa15.03■□□□□ -0
PTCD3-202ENST00000409326 ZNF266Q14584 549 aa15.02■□□□□ -0
PTCD3-202ENST00000409326 PSMG4Q5JS54 123 aa15.02■□□□□ -0
PTCD3-202ENST00000409326 MORN5Q5VZ52 161 aa15.02■□□□□ -0
PTCD3-202ENST00000409326 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.02■□□□□ -0
PTCD3-202ENST00000409326 C17orf77Q96MU5 243 aa15.02■□□□□ -0
PTCD3-202ENST00000409326 SMLR1H3BR10 107 aa15.01□□□□□ -0.01
PTCD3-202ENST00000409326 MRPS12O15235 138 aaKnown RBP15.01□□□□□ -0.01
PTCD3-202ENST00000409326 ATF4P18848 351 aaPredicted RBP15.01□□□□□ -0.01
PTCD3-202ENST00000409326 PSMB3P49720 205 aa15.01□□□□□ -0.01
PTCD3-202ENST00000409326 TM2D3Q9BRN9 247 aa15.01□□□□□ -0.01
PTCD3-202ENST00000409326 A0A087X0K7 114 aa15□□□□□ -0.01
PTCD3-202ENST00000409326 ISLRO14498 428 aa15□□□□□ -0.01
PTCD3-202ENST00000409326 ID1P41134 155 aa15□□□□□ -0.01
PTCD3-202ENST00000409326 GCSAMLQ5JQS6 135 aa15□□□□□ -0.01
PTCD3-202ENST00000409326 BPIFA4PQ86YQ2 179 aa15□□□□□ -0.01
PTCD3-202ENST00000409326 ARPC5O15511 151 aa14.99□□□□□ -0.01
PTCD3-202ENST00000409326 C16orf92Q96LL3 132 aa14.99□□□□□ -0.01
PTCD3-202ENST00000409326 ZMAT4Q9H898 229 aa14.99□□□□□ -0.01
PTCD3-202ENST00000409326 RPL35AP18077 110 aaKnown RBP14.98□□□□□ -0.01
PTCD3-202ENST00000409326 APOC4P55056 127 aa14.98□□□□□ -0.01
PTCD3-202ENST00000409326 TIMM9Q9Y5J7 89 aa14.98□□□□□ -0.01
PTCD3-202ENST00000409326 TRAV5A0A0B4J249 113 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 KIR2DL5BA0A0G2JN68 375 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 KIR2DL5BA0A0G2JPC4 375 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 FFAR4Q5NUL3 377 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 FAM78BQ5VT40 261 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 STHQ8IWL8 128 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 KIR2DL5AQ8N109 375 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 KIR2DL5BQ8NHK3 375 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 LINC00052Q96N35 136 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 SPATA25Q9BR10 227 aa14.97□□□□□ -0.01
PTCD3-202ENST00000409326 KNCNA6PVL3 124 aa14.96□□□□□ -0.01
PTCD3-202ENST00000409326 IGLC2P0DOY2 106 aa14.96□□□□□ -0.01
PTCD3-202ENST00000409326 CXCL2P19875 107 aa14.96□□□□□ -0.01
PTCD3-202ENST00000409326 OR11H4Q8NGC9 324 aa14.96□□□□□ -0.01
PTCD3-202ENST00000409326 ST6GAL2Q96JF0 529 aa14.96□□□□□ -0.01
PTCD3-202ENST00000409326 MRPL32Q9BYC8 188 aaKnown RBP14.96□□□□□ -0.01
PTCD3-202ENST00000409326 MFFQ9GZY8 342 aa14.96□□□□□ -0.01
PTCD3-202ENST00000409326 TENM3Q9P273 2699 aa14.96□□□□□ -0.02
PTCD3-202ENST00000409326 HMSDA8MTL9 139 aa14.95□□□□□ -0.02
PTCD3-202ENST00000409326 ZNF345Q14585 488 aa14.95□□□□□ -0.02
PTCD3-202ENST00000409326 ACTL10Q5JWF8 245 aa14.95□□□□□ -0.02
PTCD3-202ENST00000409326 LCN15Q6UWW0 184 aa14.95□□□□□ -0.02
PTCD3-202ENST00000409326 TRPT1Q86TN4 253 aaKnown RBP14.95□□□□□ -0.02
PTCD3-202ENST00000409326 HSD17B11Q8NBQ5 300 aa14.95□□□□□ -0.02
PTCD3-202ENST00000409326 HRH4Q9H3N8 390 aa14.95□□□□□ -0.02
PTCD3-202ENST00000409326 RFNGQ9Y644 331 aa14.95□□□□□ -0.02
PTCD3-202ENST00000409326 U3KQK5 164 aa14.95□□□□□ -0.02
PTCD3-202ENST00000409326 BORCS7-ASMTA0A0B4J1R7 106 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 TRAV8-2A0A0B4J237 113 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 UBE2CO00762 179 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 SPATA31B1PQ5VZV4 182 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 RPL7L1Q6DKI1 246 aaKnown RBP14.94□□□□□ -0.02
PTCD3-202ENST00000409326 MIR17HGQ75NE6 70 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 C20orf173Q96LM9 149 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 PSMG3Q9BT73 122 aaPredicted RBP14.94□□□□□ -0.02
PTCD3-202ENST00000409326 SLC25A2Q9BXI2 301 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 TMEM14CQ9P0S9 112 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 FUT9Q9Y231 359 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 NBEAL2Q6ZNJ1 2754 aa14.94□□□□□ -0.02
PTCD3-202ENST00000409326 hCG_2014768A0A024R1R8 64 aa14.93□□□□□ -0.02
PTCD3-202ENST00000409326 TAAR5O14804 337 aa14.93□□□□□ -0.02
PTCD3-202ENST00000409326 HLA-DRB4P13762 266 aa14.93□□□□□ -0.02
PTCD3-202ENST00000409326 ATP6V0CP27449 155 aa14.93□□□□□ -0.02
PTCD3-202ENST00000409326 FOXI2Q6ZQN5 318 aa14.93□□□□□ -0.02
PTCD3-202ENST00000409326 TCTE3Q8IZS6 198 aa14.93□□□□□ -0.02
PTCD3-202ENST00000409326 OR2G3Q8NGZ4 309 aa14.93□□□□□ -0.02
PTCD3-202ENST00000409326 FAM167A-AS1Q96KT0 104 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms