RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 FBXL19-AS1Q494R0 122 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 C10orf105Q8TEF2 133 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 RNF138Q8WVD3 245 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 UBE2E2Q96LR5 201 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 VPS25Q9BRG1 176 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 TMEM160Q9NX00 188 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 FER1L5A0AVI2 2057 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 RNF151Q2KHN1 245 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 DEFB112Q30KQ8 113 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 C1orf194Q5T5A4 169 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 WDR86Q86TI4 376 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 BIVMQ86UB2 503 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 MGST2Q99735 147 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 SEPSECSQ9HD40 501 aaKnown RBP11.41□□□□□ -0.58
ITGA6-202ENST00000409080 PKDREJQ9NTG1 2253 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 PKIAP61925 76 aa11.41□□□□□ -0.58
ITGA6-202ENST00000409080 MRPL27Q9P0M9 148 aaKnown RBP11.4□□□□□ -0.58
ITGA6-202ENST00000409080 H7C2G1 150 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 DKK1O94907 266 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 TCTAP57738 103 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 DNAL4O96015 105 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 TCRAP04437 139 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 C1QL4Q86Z23 238 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 VOPP1Q96AW1 172 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 IGHV4-39P01824 125 aa11.4□□□□□ -0.58
ITGA6-202ENST00000409080 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 NUDT10Q8NFP7 164 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 IGHV4-30-2A0A087WSY4 118 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 RNF144BQ7Z419 303 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 A0A087WWC5 75 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 A0A1W2PNU3 283 aaPredicted RBP11.39□□□□□ -0.59
ITGA6-202ENST00000409080 SLC25A34Q6PIV7 304 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 C18orf15Q96N68 181 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 RBMY1BA6NDE4 496 aaKnown RBP11.39□□□□□ -0.59
ITGA6-202ENST00000409080 RBMY1EA6NEQ0 496 aaKnown RBP11.39□□□□□ -0.59
ITGA6-202ENST00000409080 G3V318 75 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 RBMY1DP0C7P1 496 aaKnown RBP11.39□□□□□ -0.59
ITGA6-202ENST00000409080 RBMY1A1P0DJD3 496 aaKnown RBP11.39□□□□□ -0.59
ITGA6-202ENST00000409080 RBMY1CP0DJD4 496 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 HOXB4P17483 251 aaPredicted RBP11.39□□□□□ -0.59
ITGA6-202ENST00000409080 NTF4P34130 210 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 NDUFS7O75251 213 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 CD28P10747 220 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 DAD1P61803 113 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 GCSAMLQ5JQS6 135 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 EXOC3-AS1Q8N2X6 119 aa11.39□□□□□ -0.59
ITGA6-202ENST00000409080 TRAV8-6A0A0B4J262 113 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 H0YIZ8 118 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 TCTEX1D4Q5JR98 221 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 TSKUQ8WUA8 353 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 FOXC2Q99958 501 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 SELENOKQ9Y6D0 94 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 FAM90A2PQ658T7 463 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 ATP5L2Q7Z4Y8 100 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 NDUFA4L2Q9NRX3 87 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 RPL23P62829 140 aaKnown RBP11.38□□□□□ -0.59
ITGA6-202ENST00000409080 SPATA45Q537H7 98 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 RNASE7Q9H1E1 156 aaKnown RBP11.38□□□□□ -0.59
ITGA6-202ENST00000409080 FXYD7P58549 80 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 TMEM14BQ9NUH8 114 aa11.38□□□□□ -0.59
ITGA6-202ENST00000409080 C15orf62A8K5M9 175 aa11.37□□□□□ -0.59
ITGA6-202ENST00000409080 C22orf46C9J442 243 aa11.37□□□□□ -0.59
ITGA6-202ENST00000409080 RNASE1P07998 156 aaKnown RBP11.37□□□□□ -0.59
ITGA6-202ENST00000409080 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
ITGA6-202ENST00000409080 PPIFP30405 207 aaKnown RBP11.37□□□□□ -0.59
ITGA6-202ENST00000409080 DUX4L9Q6RFH8 374 aaPredicted RBP11.36□□□□□ -0.59
ITGA6-202ENST00000409080 LRRC75A-AS1Q8N1F1 130 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 CARHSP1Q9Y2V2 147 aaKnown RBP11.36□□□□□ -0.59
ITGA6-202ENST00000409080 LOC107984156A0A0G2JMH3 177 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 ARL17AQ8IVW1 177 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 TMEM158Q8WZ71 300 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 ZNF581Q9P0T4 197 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 PLXND1Q9Y4D7 1925 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 KIF26AQ9ULI4 1882 aaPredicted RBP11.36□□□□□ -0.59
ITGA6-202ENST00000409080 C2orf16Q68DN1 1984 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 IGHV4-59P01825 116 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 DEFB130BP0DP73 79 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 DEFB130AP0DP74 79 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 C9orf66Q5T8R8 295 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 PHF3Q92576 2039 aaKnown RBP11.36□□□□□ -0.59
ITGA6-202ENST00000409080 A0A087X0M5 115 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 A0A1B0GX30 115 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 RHODO00212 210 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 ZNRD1Q9P1U0 126 aa11.36□□□□□ -0.59
ITGA6-202ENST00000409080 EREGO14944 169 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 OR11H6Q8NGC7 330 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 TRAV1-1A0A0B4J248 108 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 SEC11AP67812 179 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 SMIM12Q96EX1 92 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 WFDC1Q9HC57 220 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 C15orf65H3BRN8 121 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 UQCR10Q9UDW1 63 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 OR5A1Q8NGJ0 315 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 DOCK7Q96N67 2140 aa11.35□□□□□ -0.59
ITGA6-202ENST00000409080 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms