RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 LINC00614P0C842 121 aa9.53□□□□□ -0.88
PCNX4-204ENST00000406949 CT45A10P0DMU9 189 aa9.53□□□□□ -0.88
PCNX4-204ENST00000406949 COX19Q49B96 90 aa9.53□□□□□ -0.88
PCNX4-204ENST00000406949 C5orf17Q8NAS9 161 aa9.53□□□□□ -0.88
PCNX4-204ENST00000406949 HIVEP3Q5T1R4 2406 aa9.53□□□□□ -0.88
PCNX4-204ENST00000406949 A8MWL6 223 aa9.52□□□□□ -0.88
PCNX4-204ENST00000406949 Q6ZWC4 215 aa9.52□□□□□ -0.88
PCNX4-204ENST00000406949 ST6GALNAC6Q969X2 333 aa9.52□□□□□ -0.88
PCNX4-204ENST00000406949 GPR82Q96P67 336 aa9.52□□□□□ -0.88
PCNX4-204ENST00000406949 SNHG12Q9BXW3 62 aa9.52□□□□□ -0.88
PCNX4-204ENST00000406949 NRN1Q9NPD7 142 aa9.52□□□□□ -0.88
PCNX4-204ENST00000406949 F11RQ9Y624 299 aaKnown RBP9.52□□□□□ -0.88
PCNX4-204ENST00000406949 SERTM2A0A1B0GWG4 89 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 A8MWP6 167 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 ECSCRQ19T08 205 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 FXYD5Q96DB9 178 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 KAAG1Q9UBP8 84 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 POLR3KQ9Y2Y1 108 aaPredicted RBP9.52□□□□□ -0.89
PCNX4-204ENST00000406949 CGB1A6NKQ9 187 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 BPIFA4PQ86YQ2 179 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 NUP35Q8NFH5 326 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 GRAMD2BQ96HH9 432 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 CHODLQ9H9P2 273 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 ARL2-SNX15V9GYD0 113 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 ABCA12Q86UK0 2595 aa9.52□□□□□ -0.89
PCNX4-204ENST00000406949 LRRK2Q5S007 2527 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 LY6DQ14210 128 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 RUSC1-AS1Q66K80 236 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 FAM71F2Q6NXP2 309 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 TMEM136Q6ZRR5 245 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 RCHY1Q96PM5 261 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 CSN1S1P47710 185 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 PDLIM4P50479 330 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 KLRB1Q12918 225 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 SLAQ13239 276 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 VAMP3Q15836 100 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 CIARTQ8N365 385 aaPredicted RBP9.51□□□□□ -0.89
PCNX4-204ENST00000406949 TRGV9Q99603 122 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 AAMDCQ9H7C9 122 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 IGKV1D-37A0A075B6S9 117 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 MUC21A0A0G2JKD1 596 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 MUC21A0A140T8X8 626 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 NBR2O15453 112 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 CA7P43166 264 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 MUC21Q5SSG8 566 aa9.51□□□□□ -0.89
PCNX4-204ENST00000406949 BMPR1BO00238 502 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 OR2J3O76001 311 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 RIPPLY3P57055 190 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 C8orf46Q8TAG6 207 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 TNFRSF14Q92956 283 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 KCNS1Q96KK3 526 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 SLC25A39Q9BZJ4 359 aaPredicted RBP9.5□□□□□ -0.89
PCNX4-204ENST00000406949 IGHV3OR16-13A0A075B7E8 117 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 IGHV3-74A0A0B4J1X5 117 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 M0QZ24 198 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 TDRG1Q3Y452 100 aa9.5□□□□□ -0.89
PCNX4-204ENST00000406949 RPP21Q9H633 154 aaKnown RBP9.5□□□□□ -0.89
PCNX4-204ENST00000406949 M0QZK8 103 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 SCGB2A1O75556 95 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 PMCHL1Q16048 86 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 TPTE2P1Q5T6R2 138 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 IGHV3OR16-10A0A075B7F0 116 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 TCRAP04437 139 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 SPATA45Q537H7 98 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 FBXL7Q9UJT9 491 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 NDUFS7O75251 213 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 ZNF324O75467 553 aaPredicted RBP9.49□□□□□ -0.89
PCNX4-204ENST00000406949 GOSR1O95249 250 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 DLX6P56179 175 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 LCN12Q6JVE5 192 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 Q6ZN92 141 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 ERASQ7Z444 233 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 THAP8Q8NA92 274 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
PCNX4-204ENST00000406949 JKAMPQ9P055 326 aa9.49□□□□□ -0.89
PCNX4-204ENST00000406949 M0R3E3 92 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 HBBP68871 147 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 TSKUQ8WUA8 353 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 IGF2BP2-AS1Q96M15 143 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 OR2T8A6NH00 312 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 IGLV1-47P01700 117 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 GPX1P07203 203 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 RNF125Q96EQ8 232 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 HLA-DRB1P01911 266 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 HNRNPA3P51991 378 aaKnown RBP9.48□□□□□ -0.89
PCNX4-204ENST00000406949 UCNP55089 124 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 THYN1Q9P016 225 aa9.48□□□□□ -0.89
PCNX4-204ENST00000406949 A0A1W2PS18 150 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 MFAP4P55083 255 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 DNLZQ5SXM8 178 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 C1orf194Q5T5A4 169 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 TMEM116Q8NCL8 245 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 FMC1Q96HJ9 113 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 C17orf77Q96MU5 243 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 IGHV3-49A0A0A0MS15 119 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 IGHV3-66A0A0C4DH42 116 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 SMIM27A0A1W2PRY6 76 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 ZNF785A8K8V0 405 aa9.47□□□□□ -0.89
PCNX4-204ENST00000406949 IGLC1P0CG04 106 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms