RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 PRR20CP86479 221 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 PRR20DP86480 221 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 PRR20BP86481 221 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 PRR20AP86496 221 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 C10orf113Q5VZT2 155 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 TMEM182Q6ZP80 229 aaPredicted RBP7.94□□□□□ -1.14
RPAIN-204ENST00000405578 TMEM61Q8N0U2 210 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 KCNRGQ8N5I3 272 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 PRR25Q96S07 402 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 U3KQE9 123 aa7.94□□□□□ -1.14
RPAIN-204ENST00000405578 STARD9Q9P2P6 4700 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 ZNF98A6NK75 572 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 APOHP02749 345 aaPredicted RBP7.93□□□□□ -1.14
RPAIN-204ENST00000405578 RPL7P18124 248 aaKnown RBP7.93□□□□□ -1.14
RPAIN-204ENST00000405578 GALR1P47211 349 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 CMC4P56277 68 aaPredicted RBP7.93□□□□□ -1.14
RPAIN-204ENST00000405578 ZFP69Q49AA0 526 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 SAMD13Q5VXD3 122 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 C16orf54Q6UWD8 224 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 SIGLEC15Q6ZMC9 328 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 LINC00305Q7Z4B0 112 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 OR11H4Q8NGC9 324 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 GATAD1Q8WUU5 269 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 GNPNAT1Q96EK6 184 aaPredicted RBP7.93□□□□□ -1.14
RPAIN-204ENST00000405578 RCHY1Q96PM5 261 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 ARPC5LQ9BPX5 153 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 SHANK2-AS3Q9BTD1 123 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 SLC25A39Q9BZJ4 359 aaPredicted RBP7.93□□□□□ -1.14
RPAIN-204ENST00000405578 SLC25A22Q9H936 323 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 WFDC1Q9HC57 220 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 TIMM9Q9Y5J7 89 aa7.93□□□□□ -1.14
RPAIN-204ENST00000405578 CSMD3Q7Z407 3707 aa7.92□□□□□ -1.14
RPAIN-204ENST00000405578 IGKV3-7A0A075B6H7 116 aa7.92□□□□□ -1.14
RPAIN-204ENST00000405578 MBP02144 154 aa7.92□□□□□ -1.14
RPAIN-204ENST00000405578 FFAR4Q5NUL3 377 aa7.92□□□□□ -1.14
RPAIN-204ENST00000405578 HSD17B11Q8NBQ5 300 aa7.92□□□□□ -1.14
RPAIN-204ENST00000405578 STXBP6Q8NFX7 210 aa7.92□□□□□ -1.14
RPAIN-204ENST00000405578 GLMPQ8WWB7 406 aa7.92□□□□□ -1.14
RPAIN-204ENST00000405578 RSG1Q9BU20 258 aa7.92□□□□□ -1.14
RPAIN-204ENST00000405578 TRAV2A0A0B4J234 112 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 IZUMO1RA6ND01 250 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 ZNF785A8K8V0 405 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 H3BRN7 92 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 BCL2L11O43521 198 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 ATF4P18848 351 aaPredicted RBP7.91□□□□□ -1.14
RPAIN-204ENST00000405578 TFPI2P48307 235 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 MEOX2P50222 304 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 SERF2P84101 59 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 ACOT6Q3I5F7 207 aaPredicted RBP7.91□□□□□ -1.14
RPAIN-204ENST00000405578 FAM78BQ5VT40 261 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 FAM90A2PQ658T7 463 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 RPL7L1Q6DKI1 246 aaKnown RBP7.91□□□□□ -1.14
RPAIN-204ENST00000405578 BPIFA4PQ86YQ2 179 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 GBGT1Q8N5D6 347 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 UHRF2Q96PU4 802 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 PSMG3Q9BT73 122 aaPredicted RBP7.91□□□□□ -1.14
RPAIN-204ENST00000405578 SCRT1Q9BWW7 348 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 ZNF471Q9BX82 626 aaPredicted RBP7.91□□□□□ -1.14
RPAIN-204ENST00000405578 MS4A6AQ9H2W1 248 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 NRN1Q9NPD7 142 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 SELENOKQ9Y6D0 94 aa7.91□□□□□ -1.14
RPAIN-204ENST00000405578 M6PRP20645 277 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 S100A1P23297 94 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 ATP6V0CP27449 155 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 ID1P41134 155 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 TAS2R45P59539 299 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 CD81P60033 236 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 SNRPD3P62318 126 aaKnown RBP7.9□□□□□ -1.14
RPAIN-204ENST00000405578 RHOBP62745 196 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 NDUFA5Q16718 116 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 LEMD1Q68G75 181 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 PATE2Q6UY27 113 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 TMUB2Q71RG4 321 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 WFDC3Q8IUB2 231 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 OR2G3Q8NGZ4 309 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 LRRC20Q8TCA0 184 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 TMEM37Q8WXS4 190 aa7.9□□□□□ -1.14
RPAIN-204ENST00000405578 MRPL32Q9BYC8 188 aaKnown RBP7.9□□□□□ -1.14
RPAIN-204ENST00000405578 HERC2O95714 4834 aa7.89□□□□□ -1.15
RPAIN-204ENST00000405578 A0A1W2PPV4 95 aa7.89□□□□□ -1.15
RPAIN-204ENST00000405578 BOLA2-SMG1P6H3BVE0 249 aa7.89□□□□□ -1.15
RPAIN-204ENST00000405578 TPT1P13693 172 aaKnown RBP7.89□□□□□ -1.15
RPAIN-204ENST00000405578 CXCL2P19875 107 aa7.89□□□□□ -1.15
RPAIN-204ENST00000405578 EIF5AL1Q6IS14 154 aaKnown RBP7.89□□□□□ -1.15
RPAIN-204ENST00000405578 SLC25A32Q9H2D1 315 aa7.89□□□□□ -1.15
RPAIN-204ENST00000405578 SMAD5-AS1Q9Y6J3 95 aa7.89□□□□□ -1.15
RPAIN-204ENST00000405578 SORL1Q92673 2214 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 OR11H12B2RN74 326 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 GUK1Q16774 197 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 GCSAMLQ5JQS6 135 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 AKR1C8PQ5T2L2 129 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 OR10G4Q8NGN3 311 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 OR10G9Q8NGN4 311 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 OR10G7Q8NGN6 311 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 C16orf92Q96LL3 132 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 FAM110AQ9BQ89 295 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 TUBA4BQ9H853 241 aa7.88□□□□□ -1.15
RPAIN-204ENST00000405578 SEPSECSQ9HD40 501 aaKnown RBP7.88□□□□□ -1.15
RPAIN-204ENST00000405578 CYTL1Q9NRR1 136 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms