RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 Q6AWC8 147 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 SPCS1Q9Y6A9 102 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 CACNA1DQ01668 2161 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 LINC01619G3V211 115 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 ERVK11-1P61568 191 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 RUSC1-AS1Q66K80 236 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 SIGLEC15Q6ZMC9 328 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 COPS9Q8WXC6 57 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 ASCL2Q99929 193 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 TREML4Q6UXN2 200 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 TRAV3A0A0B4J244 114 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 EREGO14944 169 aa9.55□□□□□ -0.88
RAPGEF3-204ENST00000405493 CD7P09564 240 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 ORMDL3Q8N138 153 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 SIGLEC9Q9Y336 463 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 SPATA31B1PQ5VZV4 182 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 OR11H1Q8NG94 326 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 OR11H2Q8NH07 326 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 NDUFA3O95167 84 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 ELANEP08246 267 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 ZNF562Q6V9R5 426 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 A0A1B0GWJ7 208 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 FABP5P3A8MUU1 101 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 PSMG4Q5JS54 123 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 A0A1W2PNU3 283 aaPredicted RBP9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 COQ2Q96H96 371 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 PSG8Q9UQ74 426 aa9.54□□□□□ -0.88
RAPGEF3-204ENST00000405493 ASCL4Q6XD76 172 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 MRAP2Q96G30 205 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 FANCMQ8IYD8 2048 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 PLXNA2O75051 1894 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 A0A1W2PRE2 83 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 LMO1P25800 156 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 Q6ZS49 121 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 TRAV21A0A0B4J279 112 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 H3BUT2 72 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 ATP5LO75964 103 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 IGKV1-5P01602 117 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 STAG3L3P0CL85 134 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 ZNF329Q86UD4 541 aa9.53□□□□□ -0.88
RAPGEF3-204ENST00000405493 C9orf139Q6ZV77 190 aa9.52□□□□□ -0.88
RAPGEF3-204ENST00000405493 LINC00311Q8N616 119 aa9.52□□□□□ -0.88
RAPGEF3-204ENST00000405493 FAM110DQ8TAY7 271 aaPredicted RBP9.52□□□□□ -0.88
RAPGEF3-204ENST00000405493 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.88
RAPGEF3-204ENST00000405493 JKAMPQ9P055 326 aa9.52□□□□□ -0.88
RAPGEF3-204ENST00000405493 TMEM50AO95807 157 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 TMEM14EPQ6UXP3 125 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 OR13C6PQ8NH95 151 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 C5orf30Q96GV9 206 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 ST20Q9HBF5 79 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 VPREB3Q9UKI3 123 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 TRGV4A0A0C4DH28 118 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 MGST2Q99735 147 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 DAZ1Q9NQZ3 744 aaKnown RBP9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 HELZP42694 1942 aaKnown RBP9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 GRNP28799 593 aaKnown RBP9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 ZNF843Q8N446 348 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 LOXP28300 417 aaPredicted RBP9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 ZMAT4Q9H898 229 aa9.52□□□□□ -0.89
RAPGEF3-204ENST00000405493 LINC00473A8K010 186 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 CA1P00915 261 aaPredicted RBP9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 LINC00205P59089 165 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 RPL15P61313 204 aaKnown RBP9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 RNF138Q8WVD3 245 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 DERL1Q9BUN8 251 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 MPDZO75970 2070 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 FAM208BQ5VWN6 2430 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 Q6ZR03 302 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 OR5AN1Q8NGI8 311 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 VOPP1Q96AW1 172 aa9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 SNRNP200O75643 2136 aaKnown RBP9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 IGKV2-40A0A087WW87 121 aaPredicted RBP9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 IGKV2D-40P01614 121 aaPredicted RBP9.51□□□□□ -0.89
RAPGEF3-204ENST00000405493 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 EVI2AP22794 236 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 APOC4P55056 127 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 MYLKQ15746 1914 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 PFN1P07737 140 aaKnown RBP9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 SNHG12Q9BXW3 62 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 FNDC4Q9H6D8 234 aaPredicted RBP9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 ANAPC10Q9UM13 185 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 TSSC4Q9Y5U2 329 aaPredicted RBP9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 HOXA3O43365 443 aaPredicted RBP9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 MRPL16Q9NX20 251 aaKnown RBP9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 MRPS16Q9Y3D3 137 aaKnown RBP9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 USF3Q68DE3 2245 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 A0A1B0GWB2 263 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 DKK1O94907 266 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 IGHV4-39P01824 125 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 PSG1P11464 419 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 Q8NA96 180 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 VGLL1Q99990 258 aa9.5□□□□□ -0.89
RAPGEF3-204ENST00000405493 TRGV9Q99603 122 aa9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 HEATR1Q9H583 2144 aaKnown RBP9.49□□□□□ -0.89
RAPGEF3-204ENST00000405493 H3BUA1 57 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms