RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PYYP10082 97 aa16.21■□□□□ 0.18
TPM1-208ENST00000404484 GP9P14770 177 aa16.21■□□□□ 0.18
TPM1-208ENST00000404484 ATP5G3P48201 142 aa16.21■□□□□ 0.18
TPM1-208ENST00000404484 RNF152Q8N8N0 203 aa16.21■□□□□ 0.18
TPM1-208ENST00000404484 ZFAND3Q9H8U3 227 aa16.21■□□□□ 0.18
TPM1-208ENST00000404484 YTHDF2Q9Y5A9 579 aaKnown RBP16.21■□□□□ 0.18
TPM1-208ENST00000404484 ZNF98A6NK75 572 aa16.2■□□□□ 0.18
TPM1-208ENST00000404484 PPP5D1E7EU14 171 aa16.2■□□□□ 0.18
TPM1-208ENST00000404484 IGHV3-11P01762 117 aa16.2■□□□□ 0.18
TPM1-208ENST00000404484 FAM74A3Q4VXF1 159 aa16.2■□□□□ 0.18
TPM1-208ENST00000404484 C12orf54Q6X4T0 127 aa16.2■□□□□ 0.18
TPM1-208ENST00000404484 TMEM190Q8WZ59 177 aa16.2■□□□□ 0.18
TPM1-208ENST00000404484 NDUFA4O00483 81 aa16.19■□□□□ 0.18
TPM1-208ENST00000404484 FAM90A2PQ658T7 463 aa16.19■□□□□ 0.18
TPM1-208ENST00000404484 LEMD1Q68G75 181 aa16.19■□□□□ 0.18
TPM1-208ENST00000404484 Q6ZSV7 163 aa16.19■□□□□ 0.18
TPM1-208ENST00000404484 OR4F17Q8NGA8 305 aa16.19■□□□□ 0.18
TPM1-208ENST00000404484 NIPSNAP3BQ9BS92 247 aa16.19■□□□□ 0.18
TPM1-208ENST00000404484 GGCTO75223 188 aaKnown RBP16.18■□□□□ 0.18
TPM1-208ENST00000404484 NBEAP1P0C6P0 100 aa16.18■□□□□ 0.18
TPM1-208ENST00000404484 HIST1H1EP10412 219 aaKnown RBP16.18■□□□□ 0.18
TPM1-208ENST00000404484 KIAA0141Q14154 515 aaPredicted RBP16.18■□□□□ 0.18
TPM1-208ENST00000404484 GUCA2BQ16661 112 aa16.18■□□□□ 0.18
TPM1-208ENST00000404484 AWAT1Q58HT5 328 aa16.18■□□□□ 0.18
TPM1-208ENST00000404484 LCNL1Q6ZST4 164 aa16.18■□□□□ 0.18
TPM1-208ENST00000404484 MYOZ3Q8TDC0 251 aa16.18■□□□□ 0.18
TPM1-208ENST00000404484 METTL26Q96S19 204 aa16.18■□□□□ 0.18
TPM1-208ENST00000404484 PEF1Q9UBV8 284 aaKnown RBP16.18■□□□□ 0.18
TPM1-208ENST00000404484 IGHV3-35A0A0C4DH35 117 aa16.17■□□□□ 0.18
TPM1-208ENST00000404484 RPL7P18124 248 aaKnown RBP16.17■□□□□ 0.18
TPM1-208ENST00000404484 ZNF414Q96IQ9 312 aa16.17■□□□□ 0.18
TPM1-208ENST00000404484 TCEAL7Q9BRU2 100 aa16.17■□□□□ 0.18
TPM1-208ENST00000404484 FOXL1Q12952 345 aa16.17■□□□□ 0.18
TPM1-208ENST00000404484 UBE2E2Q96LR5 201 aa16.17■□□□□ 0.18
TPM1-208ENST00000404484 ZNF727A8MUV8 499 aa16.16■□□□□ 0.18
TPM1-208ENST00000404484 RPLP1P05386 114 aaKnown RBP16.16■□□□□ 0.18
TPM1-208ENST00000404484 C10orf99Q6UWK7 81 aa16.16■□□□□ 0.18
TPM1-208ENST00000404484 KLHDC1Q8N7A1 406 aa16.16■□□□□ 0.18
TPM1-208ENST00000404484 C11orf52Q96A22 123 aa16.16■□□□□ 0.18
TPM1-208ENST00000404484 GPR82Q96P67 336 aa16.16■□□□□ 0.18
TPM1-208ENST00000404484 SMIM7Q9BQ49 75 aa16.16■□□□□ 0.18
TPM1-208ENST00000404484 TRBV12-3P01733 135 aa16.15■□□□□ 0.18
TPM1-208ENST00000404484 BLNKQ8WV28 456 aa16.15■□□□□ 0.18
TPM1-208ENST00000404484 RPUSD4Q96CM3 377 aaKnown RBP16.15■□□□□ 0.18
TPM1-208ENST00000404484 H3BQ15 152 aa16.14■□□□□ 0.17
TPM1-208ENST00000404484 LGALS1P09382 135 aaKnown RBP16.14■□□□□ 0.17
TPM1-208ENST00000404484 NPPCP23582 126 aa16.14■□□□□ 0.17
TPM1-208ENST00000404484 PNRC1Q12796 327 aaPredicted RBP16.14■□□□□ 0.17
TPM1-208ENST00000404484 C1orf194Q5T5A4 169 aa16.14■□□□□ 0.17
TPM1-208ENST00000404484 OR8I2Q8N0Y5 310 aa16.14■□□□□ 0.17
TPM1-208ENST00000404484 CLRN3Q8NCR9 226 aa16.14■□□□□ 0.17
TPM1-208ENST00000404484 PARLQ9H300 379 aa16.14■□□□□ 0.17
TPM1-208ENST00000404484 C16orf95Q9H693 158 aa16.14■□□□□ 0.17
TPM1-208ENST00000404484 GGTLC3B5MD39 225 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 IGLC2P0DOY2 106 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 SUMO1P63165 101 aaKnown RBP16.13■□□□□ 0.17
TPM1-208ENST00000404484 C3orf56Q8N813 242 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 TVP23CQ96ET8 276 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 C20orf24Q9BUV8 137 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 SCO2A0A1W2PP80 73 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 CLPSL1A2RUU4 121 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 M0R036 132 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 MRPS12O15235 138 aaKnown RBP16.13■□□□□ 0.17
TPM1-208ENST00000404484 CRYBB3P26998 211 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 PDE6HQ13956 83 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 ZNF674Q2M3X9 581 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 FAM106AQ4KMX7 169 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 NAT8Q9UHE5 227 aa16.13■□□□□ 0.17
TPM1-208ENST00000404484 IGHV3OR16-8A0A075B7F1 116 aa16.12■□□□□ 0.17
TPM1-208ENST00000404484 BUB3O43684 328 aa16.12■□□□□ 0.17
TPM1-208ENST00000404484 NDUFB4O95168 129 aa16.12■□□□□ 0.17
TPM1-208ENST00000404484 RANP62826 216 aaKnown RBP16.12■□□□□ 0.17
TPM1-208ENST00000404484 LYPD1Q8N2G4 141 aa16.12■□□□□ 0.17
TPM1-208ENST00000404484 OTORQ9NRC9 128 aa16.12■□□□□ 0.17
TPM1-208ENST00000404484 ZNF586Q9NXT0 402 aa16.12■□□□□ 0.17
TPM1-208ENST00000404484 TRBV19A0A075B6N1 114 aa16.11■□□□□ 0.17
TPM1-208ENST00000404484 NDUFA7O95182 113 aa16.11■□□□□ 0.17
TPM1-208ENST00000404484 RHEBQ15382 184 aa16.11■□□□□ 0.17
TPM1-208ENST00000404484 TMEM241Q24JQ0 296 aa16.11■□□□□ 0.17
TPM1-208ENST00000404484 GPHB5Q86YW7 130 aa16.11■□□□□ 0.17
TPM1-208ENST00000404484 OR5B12Q96R08 314 aa16.11■□□□□ 0.17
TPM1-208ENST00000404484 U3KQE9 123 aa16.11■□□□□ 0.17
TPM1-208ENST00000404484 ATF4P18848 351 aaPredicted RBP16.1■□□□□ 0.17
TPM1-208ENST00000404484 MYCNOSP40205 109 aa16.1■□□□□ 0.17
TPM1-208ENST00000404484 GALR1P47211 349 aa16.1■□□□□ 0.17
TPM1-208ENST00000404484 WFDC12Q8WWY7 111 aa16.1■□□□□ 0.17
TPM1-208ENST00000404484 HIST1H2BAQ96A08 127 aa16.1■□□□□ 0.17
TPM1-208ENST00000404484 ELOVL1Q9BW60 279 aa16.1■□□□□ 0.17
TPM1-208ENST00000404484 A0A1W2PS18 150 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 CDX1P47902 265 aaPredicted RBP16.09■□□□□ 0.17
TPM1-208ENST00000404484 RPEL1Q2QD12 228 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 ATRAIDQ6UW56 229 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 C5orf17Q8NAS9 161 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 GRAMD2BQ96HH9 432 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 Q9H3A6 140 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 B4DEV8 164 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 ZNF253O75346 499 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 MEOX2P50222 304 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 SDF2L1Q9HCN8 221 aa16.09■□□□□ 0.17
TPM1-208ENST00000404484 ZNF320A2RRD8 509 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms