RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 MORN5Q5VZ52 161 aa21.97■■□□□ 1.11
USP42-202ENST00000404008 TMUB2Q71RG4 321 aa21.97■■□□□ 1.11
USP42-202ENST00000404008 PSMG3Q9BT73 122 aaPredicted RBP21.97■■□□□ 1.11
USP42-202ENST00000404008 RNF24Q9Y225 148 aa21.97■■□□□ 1.11
USP42-202ENST00000404008 OR4C46A6NHA9 309 aa21.96■■□□□ 1.11
USP42-202ENST00000404008 BCL2L11O43521 198 aa21.96■■□□□ 1.11
USP42-202ENST00000404008 LGALSLQ3ZCW2 172 aaPredicted RBP21.96■■□□□ 1.11
USP42-202ENST00000404008 GTSCR1Q86UQ5 136 aa21.96■■□□□ 1.11
USP42-202ENST00000404008 STXBP6Q8NFX7 210 aa21.96■■□□□ 1.11
USP42-202ENST00000404008 GPR82Q96P67 336 aa21.96■■□□□ 1.11
USP42-202ENST00000404008 KANTRA0A1W2PQU2 76 aa21.95■■□□□ 1.1
USP42-202ENST00000404008 TFPI2P48307 235 aa21.95■■□□□ 1.1
USP42-202ENST00000404008 SH3BGRL3Q9H299 93 aa21.95■■□□□ 1.1
USP42-202ENST00000404008 TRAV2A0A0B4J234 112 aa21.94■■□□□ 1.1
USP42-202ENST00000404008 DNASE2O00115 360 aaPredicted RBP21.94■■□□□ 1.1
USP42-202ENST00000404008 DEFA6Q01524 100 aa21.94■■□□□ 1.1
USP42-202ENST00000404008 OR2G3Q8NGZ4 309 aa21.94■■□□□ 1.1
USP42-202ENST00000404008 GNPNAT1Q96EK6 184 aaPredicted RBP21.94■■□□□ 1.1
USP42-202ENST00000404008 PFDN1O60925 122 aa21.93■■□□□ 1.1
USP42-202ENST00000404008 CD7P09564 240 aa21.93■■□□□ 1.1
USP42-202ENST00000404008 GALR1P47211 349 aa21.93■■□□□ 1.1
USP42-202ENST00000404008 CD81P60033 236 aa21.93■■□□□ 1.1
USP42-202ENST00000404008 Q8N1Y9 231 aa21.93■■□□□ 1.1
USP42-202ENST00000404008 DCANP1Q8TF63 244 aa21.93■■□□□ 1.1
USP42-202ENST00000404008 NRN1Q9NPD7 142 aa21.93■■□□□ 1.1
USP42-202ENST00000404008 SMAD5-AS1Q9Y6J3 95 aa21.93■■□□□ 1.1
USP42-202ENST00000404008 RPL7P18124 248 aaKnown RBP21.92■■□□□ 1.1
USP42-202ENST00000404008 FAM78BQ5VT40 261 aa21.92■■□□□ 1.1
USP42-202ENST00000404008 WFDC3Q8IUB2 231 aa21.92■■□□□ 1.1
USP42-202ENST00000404008 SEPSECSQ9HD40 501 aaKnown RBP21.92■■□□□ 1.1
USP42-202ENST00000404008 K7EIL1 84 aa21.91■■□□□ 1.1
USP42-202ENST00000404008 K7EQG2 157 aa21.91■■□□□ 1.1
USP42-202ENST00000404008 TRAV5A0A0B4J249 113 aa21.9■■□□□ 1.1
USP42-202ENST00000404008 SERF2P84101 59 aa21.9■■□□□ 1.1
USP42-202ENST00000404008 ACOT6Q3I5F7 207 aaPredicted RBP21.9■■□□□ 1.1
USP42-202ENST00000404008 MRPS12O15235 138 aaKnown RBP21.89■■□□□ 1.1
USP42-202ENST00000404008 M6PRP20645 277 aa21.89■■□□□ 1.1
USP42-202ENST00000404008 SPATA31B1PQ5VZV4 182 aa21.89■■□□□ 1.1
USP42-202ENST00000404008 C9orf62Q8N4C0 152 aa21.89■■□□□ 1.1
USP42-202ENST00000404008 C17orf77Q96MU5 243 aa21.89■■□□□ 1.1
USP42-202ENST00000404008 ZNF471Q9BX82 626 aaPredicted RBP21.89■■□□□ 1.1
USP42-202ENST00000404008 MRPL32Q9BYC8 188 aaKnown RBP21.89■■□□□ 1.1
USP42-202ENST00000404008 MIR17HGQ75NE6 70 aa21.88■■□□□ 1.09
USP42-202ENST00000404008 BPIFA4PQ86YQ2 179 aa21.88■■□□□ 1.09
USP42-202ENST00000404008 FAM24BQ8N5W8 94 aa21.88■■□□□ 1.09
USP42-202ENST00000404008 C19orf73Q9NVV2 129 aa21.88■■□□□ 1.09
USP42-202ENST00000404008 FUT9Q9Y231 359 aa21.88■■□□□ 1.09
USP42-202ENST00000404008 RAB2AP61019 212 aa21.87■■□□□ 1.09
USP42-202ENST00000404008 ODF3L2Q3SX64 289 aa21.87■■□□□ 1.09
USP42-202ENST00000404008 ATF4P18848 351 aaPredicted RBP21.87■■□□□ 1.09
USP42-202ENST00000404008 RHOBP62745 196 aa21.87■■□□□ 1.09
USP42-202ENST00000404008 FAM110AQ9BQ89 295 aa21.87■■□□□ 1.09
USP42-202ENST00000404008 SPP1P10451 314 aa21.86■■□□□ 1.09
USP42-202ENST00000404008 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa21.86■■□□□ 1.09
USP42-202ENST00000404008 OR10G4Q8NGN3 311 aa21.86■■□□□ 1.09
USP42-202ENST00000404008 OR10G9Q8NGN4 311 aa21.86■■□□□ 1.09
USP42-202ENST00000404008 OR10G7Q8NGN6 311 aa21.86■■□□□ 1.09
USP42-202ENST00000404008 SLC25A2Q9BXI2 301 aa21.86■■□□□ 1.09
USP42-202ENST00000404008 WFDC10AQ9H1F0 79 aa21.86■■□□□ 1.09
USP42-202ENST00000404008 UBQLN2Q9UHD9 624 aa21.86■■□□□ 1.09
USP42-202ENST00000404008 A0A087X0K7 114 aa21.85■■□□□ 1.09
USP42-202ENST00000404008 SOCS3O14543 225 aa21.85■■□□□ 1.09
USP42-202ENST00000404008 MBP02144 154 aa21.85■■□□□ 1.09
USP42-202ENST00000404008 MEOX2P50222 304 aa21.85■■□□□ 1.09
USP42-202ENST00000404008 FAM167A-AS1Q96KT0 104 aa21.85■■□□□ 1.09
USP42-202ENST00000404008 MAP6D1Q9H9H5 199 aa21.85■■□□□ 1.09
USP42-202ENST00000404008 OR11H12B2RN74 326 aa21.84■■□□□ 1.09
USP42-202ENST00000404008 IGLC2P0DOY2 106 aa21.84■■□□□ 1.09
USP42-202ENST00000404008 CMC4P56277 68 aaPredicted RBP21.84■■□□□ 1.09
USP42-202ENST00000404008 EIF5AP63241 154 aaKnown RBP21.84■■□□□ 1.09
USP42-202ENST00000404008 STOML3Q8TAV4 291 aa21.84■■□□□ 1.09
USP42-202ENST00000404008 TMEM14CQ9P0S9 112 aa21.84■■□□□ 1.09
USP42-202ENST00000404008 SAMD13Q5VXD3 122 aa21.83■■□□□ 1.08
USP42-202ENST00000404008 ZNF688P0C7X2 276 aa21.82■■□□□ 1.08
USP42-202ENST00000404008 TPT1P13693 172 aaKnown RBP21.82■■□□□ 1.08
USP42-202ENST00000404008 NKX2-5P52952 324 aaPredicted RBP21.82■■□□□ 1.08
USP42-202ENST00000404008 TMEM41BQ5BJD5 291 aa21.82■■□□□ 1.08
USP42-202ENST00000404008 FAM122CQ6P4D5 195 aa21.82■■□□□ 1.08
USP42-202ENST00000404008 BAP18Q8IXM2 172 aa21.82■■□□□ 1.08
USP42-202ENST00000404008 RPP25LQ8N5L8 163 aaKnown RBP21.82■■□□□ 1.08
USP42-202ENST00000404008 DEFB125Q8N687 156 aa21.82■■□□□ 1.08
USP42-202ENST00000404008 MRAPQ8TCY5 172 aa21.82■■□□□ 1.08
USP42-202ENST00000404008 HRH4Q9H3N8 390 aa21.81■■□□□ 1.08
USP42-202ENST00000404008 RPRMQ9NS64 109 aa21.81■■□□□ 1.08
USP42-202ENST00000404008 A0A1W2PPV4 95 aa21.8■■□□□ 1.08
USP42-202ENST00000404008 H3BQ15 152 aa21.8■■□□□ 1.08
USP42-202ENST00000404008 ISLRO14498 428 aa21.8■■□□□ 1.08
USP42-202ENST00000404008 SEC11BP0C7V7 166 aa21.8■■□□□ 1.08
USP42-202ENST00000404008 IGHV4-30-4P0DP06 118 aa21.8■■□□□ 1.08
USP42-202ENST00000404008 PYYP10082 97 aa21.8■■□□□ 1.08
USP42-202ENST00000404008 PSMB3P49720 205 aa21.8■■□□□ 1.08
USP42-202ENST00000404008 SNRPD3P62318 126 aaKnown RBP21.8■■□□□ 1.08
USP42-202ENST00000404008 C16orf92Q96LL3 132 aa21.8■■□□□ 1.08
USP42-202ENST00000404008 SNRPCP09234 159 aaKnown RBP21.79■■□□□ 1.08
USP42-202ENST00000404008 C4BPBP20851 252 aa21.79■■□□□ 1.08
USP42-202ENST00000404008 ID1P41134 155 aa21.79■■□□□ 1.08
USP42-202ENST00000404008 TAS2R45P59539 299 aa21.79■■□□□ 1.08
USP42-202ENST00000404008 DEFB131AP59861 70 aa21.79■■□□□ 1.08
USP42-202ENST00000404008 KHDC3LQ587J8 217 aa21.79■■□□□ 1.08
USP42-202ENST00000404008 APRG1Q8IVJ8 170 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms