RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 OR1L4Q8NGR5 311 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 ST6GAL2Q96JF0 529 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 CITED4Q96RK1 184 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 SRD5A3Q9H8P0 318 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 MAP6D1Q9H9H5 199 aa12.78□□□□□ -0.36
PTCHD3P3-201ENST00000403073 TRAV5A0A0B4J249 113 aa12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 A0A1B0GVG6 124 aa12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 GALR1P47211 349 aa12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 CMC4P56277 68 aaPredicted RBP12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 DEFB131AP59861 70 aa12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 C17orf77Q96MU5 243 aa12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 PFDN5Q99471 154 aa12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 ASCL2Q99929 193 aa12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 PARD6GQ9BYG4 376 aaPredicted RBP12.77□□□□□ -0.37
PTCHD3P3-201ENST00000403073 RBMY1BA6NDE4 496 aaKnown RBP12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 RBMY1EA6NEQ0 496 aaKnown RBP12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 RBMY1DP0C7P1 496 aaKnown RBP12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 ZNF688P0C7X2 276 aa12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 GATAD1Q8WUU5 269 aa12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 GPR82Q96P67 336 aa12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 B9D2Q9BPU9 175 aa12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 FAM110AQ9BQ89 295 aa12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 MFFQ9GZY8 342 aa12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
PTCHD3P3-201ENST00000403073 RPL7P18124 248 aaKnown RBP12.75□□□□□ -0.37
PTCHD3P3-201ENST00000403073 ZNF266Q14584 549 aa12.75□□□□□ -0.37
PTCHD3P3-201ENST00000403073 LINC00322Q6ZN03 302 aaPredicted RBP12.75□□□□□ -0.37
PTCHD3P3-201ENST00000403073 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 PSMG4Q5JS54 123 aa12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 FFAR4Q5NUL3 377 aa12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 RPL7L1Q6DKI1 246 aaKnown RBP12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 SBSPONQ8IVN8 264 aa12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 HSD17B11Q8NBQ5 300 aa12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 RNF24Q9Y225 148 aa12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 SORL1Q92673 2214 aa12.74□□□□□ -0.37
PTCHD3P3-201ENST00000403073 HMSDA8MTL9 139 aa12.73□□□□□ -0.37
PTCHD3P3-201ENST00000403073 SOCS3O14543 225 aa12.73□□□□□ -0.37
PTCHD3P3-201ENST00000403073 MRPS12O15235 138 aaKnown RBP12.73□□□□□ -0.37
PTCHD3P3-201ENST00000403073 ATF4P18848 351 aaPredicted RBP12.73□□□□□ -0.37
PTCHD3P3-201ENST00000403073 FAM78BQ5VT40 261 aa12.73□□□□□ -0.37
PTCHD3P3-201ENST00000403073 SPATA31B1PQ5VZV4 182 aa12.73□□□□□ -0.37
PTCHD3P3-201ENST00000403073 LINC00052Q96N35 136 aa12.73□□□□□ -0.37
PTCHD3P3-201ENST00000403073 SEPSECSQ9HD40 501 aaKnown RBP12.73□□□□□ -0.37
PTCHD3P3-201ENST00000403073 CXCL2P19875 107 aa12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 ATP6V0CP27449 155 aa12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 SNRPD3P62318 126 aaKnown RBP12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 IGFL4Q6B9Z1 124 aa12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 MIR17HGQ75NE6 70 aa12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 BPIFA4PQ86YQ2 179 aa12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 TCTE3Q8IZS6 198 aa12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 C16orf92Q96LL3 132 aa12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 TIMM9Q9Y5J7 89 aa12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 PRKDCP78527 4128 aaKnown RBP12.72□□□□□ -0.37
PTCHD3P3-201ENST00000403073 BORCS7-ASMTA0A0B4J1R7 106 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 KNCNA6PVL3 124 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 TAAR5O14804 337 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 ID1P41134 155 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 MEOX2P50222 304 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 HAGHQ16775 308 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 AKAP14Q86UN6 197 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.37
PTCHD3P3-201ENST00000403073 A0A087X0K7 114 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 LOC102724200A0A096LPH7 203 aaPredicted RBP12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 TRAV8-2A0A0B4J237 113 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 H3BQ15 152 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 H3BTX0 84 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 ISLRO14498 428 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 PSMB3P49720 205 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 CD300CQ08708 224 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 C20orf173Q96LM9 149 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 SH3BGRL3Q9H299 93 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 FUT9Q9Y231 359 aa12.7□□□□□ -0.38
PTCHD3P3-201ENST00000403073 IGLC2P0DOY2 106 aa12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 DEFB1P60022 68 aa12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 ZNF345Q14585 488 aa12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 ACOT6Q3I5F7 207 aaPredicted RBP12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 ACTL10Q5JWF8 245 aa12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 LRRC20Q8TCA0 184 aa12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 FAM167A-AS1Q96KT0 104 aa12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 ARPC5LQ9BPX5 153 aa12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 PSMG3Q9BT73 122 aaPredicted RBP12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 SLC25A2Q9BXI2 301 aa12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 MRPL32Q9BYC8 188 aaKnown RBP12.69□□□□□ -0.38
PTCHD3P3-201ENST00000403073 A0A0D9SG52 128 aa12.68□□□□□ -0.38
PTCHD3P3-201ENST00000403073 EIF3GO75821 320 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTCHD3P3-201ENST00000403073 JTBO76095 146 aa12.68□□□□□ -0.38
PTCHD3P3-201ENST00000403073 PYYP10082 97 aa12.68□□□□□ -0.38
PTCHD3P3-201ENST00000403073 RAB2AP61019 212 aa12.68□□□□□ -0.38
PTCHD3P3-201ENST00000403073 SAMD13Q5VXD3 122 aa12.68□□□□□ -0.38
PTCHD3P3-201ENST00000403073 RNF182Q8N6D2 247 aa12.68□□□□□ -0.38
PTCHD3P3-201ENST00000403073 TMEM14CQ9P0S9 112 aa12.68□□□□□ -0.38
PTCHD3P3-201ENST00000403073 C1QBP02746 253 aa12.67□□□□□ -0.38
PTCHD3P3-201ENST00000403073 M6PRP20645 277 aa12.67□□□□□ -0.38
PTCHD3P3-201ENST00000403073 HLA-DMBP28068 263 aa12.67□□□□□ -0.38
PTCHD3P3-201ENST00000403073 RHOBP62745 196 aa12.67□□□□□ -0.38
PTCHD3P3-201ENST00000403073 STHQ8IWL8 128 aa12.67□□□□□ -0.38
PTCHD3P3-201ENST00000403073 OR10G4Q8NGN3 311 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms