RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SPRY3O43610 288 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 RPL32P62910 135 aaKnown RBP8.12□□□□□ -1.11
PTPRM-203ENST00000400060 PIFOQ8TCI5 191 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 LINC00479Q96M42 142 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 C11orf68Q9H3H3 251 aaKnown RBP8.12□□□□□ -1.11
PTPRM-203ENST00000400060 LSM4Q9Y4Z0 139 aaKnown RBP8.12□□□□□ -1.11
PTPRM-203ENST00000400060 A0A087WX48 190 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 TRAV40A0A0B4J280 105 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 PRR19A6NJB7 356 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 FOXF2Q12947 444 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 ANKRD29Q8N6D5 301 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 BRWD1Q9NSI6 2320 aa8.12□□□□□ -1.11
PTPRM-203ENST00000400060 SLC50A1Q9BRV3 221 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 M0R1B8 84 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 ARMS2P0C7Q2 107 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 C1orf210Q8IVY1 113 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 KLK15Q9H2R5 256 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 CHD3Q12873 2000 aaKnown RBP8.11□□□□□ -1.11
PTPRM-203ENST00000400060 A0A1W2PR77 199 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 FXYD2P54710 66 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 AMTNQ6UX39 209 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 TMEM14CQ9P0S9 112 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 CACNA1IQ9P0X4 2223 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 KIF26AQ9ULI4 1882 aaPredicted RBP8.11□□□□□ -1.11
PTPRM-203ENST00000400060 PMS2P5A8MQ11 134 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 IGHV3-13P01766 116 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 PDE6HQ13956 83 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 SFTA2Q6UW10 78 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 JMJD8Q96S16 334 aa8.11□□□□□ -1.11
PTPRM-203ENST00000400060 F8VRH5 84 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 SAA1P0DJI8 122 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-203ENST00000400060 PCP2Q8IVA1 136 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 PLXNB3Q9ULL4 1909 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 A0A1B0GXF2 115 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 TMEM14BQ9NUH8 114 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 IGLV3-19P01714 112 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 SPINK14Q6IE38 97 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 Q71RC1 249 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-203ENST00000400060 SLC25A45Q8N413 288 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 TMEM141Q96I45 108 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 CHCHD2Q9Y6H1 151 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-203ENST00000400060 NDUFC2O95298 119 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 SAA2P0DJI9 122 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-203ENST00000400060 ODF3L1Q8IXM7 274 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 VWCEQ96DN2 955 aa8.1□□□□□ -1.11
PTPRM-203ENST00000400060 ALPK2Q86TB3 2170 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 SPTBP11277 2137 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 IGHV1-45A0A0A0MS14 117 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 TRBV6-1A0A0K0K1D8 114 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 SH2D1AO60880 128 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 MRPL51Q4U2R6 128 aaKnown RBP8.09□□□□□ -1.11
PTPRM-203ENST00000400060 DEFB109BQ30KR1 87 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 PMS2CLQ68D20 193 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 HCP5Q6MZN7 132 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 ZCCHC24Q8N2G6 241 aaKnown RBP8.09□□□□□ -1.11
PTPRM-203ENST00000400060 NUP37Q8NFH4 326 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 DNAJC30Q96LL9 226 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 FZR1Q9UM11 496 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 TNFRSF18Q9Y5U5 241 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 CEP290O15078 2479 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 H3BTX0 84 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 UQCRQO14949 82 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 RNASE2P10153 161 aaKnown RBP8.09□□□□□ -1.11
PTPRM-203ENST00000400060 ZNF581Q9P0T4 197 aa8.09□□□□□ -1.11
PTPRM-203ENST00000400060 EPOPA6NHQ4 379 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 LINC01619G3V211 115 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 FAM159AQ6UWV7 190 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 MRAPQ8TCY5 172 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 MNX1P50219 401 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-203ENST00000400060 LOXL3P58215 753 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 FGFBP3Q8TAT2 258 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 KLF14Q8TD94 323 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-203ENST00000400060 LINC00473A8K010 186 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 RPL11P62913 178 aaKnown RBP8.08□□□□□ -1.12
PTPRM-203ENST00000400060 NTN5Q8WTR8 489 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-203ENST00000400060 IGLV3-12A0A075B6K2 115 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 PRR30Q53SZ7 412 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-203ENST00000400060 LINC00173Q6ZV60 143 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 MAFAQ8NHW3 353 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-203ENST00000400060 C20orf78Q9BR46 151 aa8.08□□□□□ -1.12
PTPRM-203ENST00000400060 TRAV12-1A0A0B4J245 112 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 CENPVL3A0A0U1RRI6 287 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 TMEM167AQ8TBQ9 72 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 MRPL20Q9BYC9 149 aaKnown RBP8.07□□□□□ -1.12
PTPRM-203ENST00000400060 C5orf63A6NC05 138 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 MAGEA5P43359 124 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 FOXC1Q12948 553 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 DKK2Q9UBU2 259 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 CFHR2P36980 270 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 ID1P41134 155 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 ZNF415Q09FC8 603 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 ZNF826PQ6ZT77 177 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 THAP8Q8NA92 274 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 METTL26Q96S19 204 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 PRADC1Q9BSG0 188 aa8.07□□□□□ -1.12
PTPRM-203ENST00000400060 FAM186AA6NE01 2351 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms