RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 B2MP61769 119 aa11.65□□□□□ -0.54
MBD1-207ENST00000398488 RAB31Q13636 194 aa11.65□□□□□ -0.54
MBD1-207ENST00000398488 LINC00305Q7Z4B0 112 aa11.65□□□□□ -0.54
MBD1-207ENST00000398488 AQP10Q96PS8 301 aa11.65□□□□□ -0.54
MBD1-207ENST00000398488 FAM110AQ9BQ89 295 aa11.65□□□□□ -0.54
MBD1-207ENST00000398488 FXYD6-FXYD2A0A087WZ82 144 aa11.65□□□□□ -0.55
MBD1-207ENST00000398488 SNRPCP09234 159 aaKnown RBP11.65□□□□□ -0.55
MBD1-207ENST00000398488 FGL1Q08830 312 aa11.65□□□□□ -0.55
MBD1-207ENST00000398488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.55
MBD1-207ENST00000398488 RETNQ9HD89 108 aa11.65□□□□□ -0.55
MBD1-207ENST00000398488 DNAJC4Q9NNZ3 241 aa11.65□□□□□ -0.55
MBD1-207ENST00000398488 PFDN2Q9UHV9 154 aa11.65□□□□□ -0.55
MBD1-207ENST00000398488 TNFSF18Q9UNG2 199 aa11.65□□□□□ -0.55
MBD1-207ENST00000398488 NBEAL2Q6ZNJ1 2754 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 COX7A2P2O60397 106 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 MPDU1O75352 247 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 RPL35AP18077 110 aaKnown RBP11.64□□□□□ -0.55
MBD1-207ENST00000398488 PXDC1Q5TGL8 231 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 C10orf113Q5VZT2 155 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 SPATA31B1PQ5VZV4 182 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 IGFL4Q6B9Z1 124 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 C20orf173Q96LM9 149 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 AGRNO00468 2067 aa11.64□□□□□ -0.55
MBD1-207ENST00000398488 PSMG4Q5JS54 123 aa11.63□□□□□ -0.55
MBD1-207ENST00000398488 Q6ZRG5 221 aa11.63□□□□□ -0.55
MBD1-207ENST00000398488 OR11H4Q8NGC9 324 aa11.63□□□□□ -0.55
MBD1-207ENST00000398488 TM2D3Q9BRN9 247 aa11.63□□□□□ -0.55
MBD1-207ENST00000398488 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
MBD1-207ENST00000398488 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
MBD1-207ENST00000398488 ELOA3CA0A087WX78 387 aaPredicted RBP11.61□□□□□ -0.55
MBD1-207ENST00000398488 LOC102724200A0A096LPH7 203 aaPredicted RBP11.61□□□□□ -0.55
MBD1-207ENST00000398488 H3BTX0 84 aa11.61□□□□□ -0.55
MBD1-207ENST00000398488 HLA-DMBP28068 263 aa11.61□□□□□ -0.55
MBD1-207ENST00000398488 GALR1P47211 349 aa11.61□□□□□ -0.55
MBD1-207ENST00000398488 GDF5OSQ5U4N7 250 aa11.61□□□□□ -0.55
MBD1-207ENST00000398488 hCG_2014768A0A024R1R8 64 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 EIF3GO75821 320 aaKnown RBP eCLIP11.6□□□□□ -0.55
MBD1-207ENST00000398488 IFNA5P01569 189 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 NHLRC4P0CG21 123 aaPredicted RBP11.6□□□□□ -0.55
MBD1-207ENST00000398488 CMC4P56277 68 aaPredicted RBP11.6□□□□□ -0.55
MBD1-207ENST00000398488 MIR17HGQ75NE6 70 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 OR1L4Q8NGR5 311 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 ST6GAL2Q96JF0 529 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 LINC00052Q96N35 136 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 PARD6GQ9BYG4 376 aaPredicted RBP11.6□□□□□ -0.55
MBD1-207ENST00000398488 SEPSECSQ9HD40 501 aaKnown RBP11.6□□□□□ -0.55
MBD1-207ENST00000398488 A0A1B0GVG6 124 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 H3BQ15 152 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 ARPC5O15511 151 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 RPL7P18124 248 aaKnown RBP11.6□□□□□ -0.55
MBD1-207ENST00000398488 ACTL10Q5JWF8 245 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 RNF182Q8N6D2 247 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 GPR82Q96P67 336 aa11.6□□□□□ -0.55
MBD1-207ENST00000398488 F6UB75 175 aa11.59□□□□□ -0.55
MBD1-207ENST00000398488 FFAR4Q5NUL3 377 aa11.59□□□□□ -0.55
MBD1-207ENST00000398488 RPL7L1Q6DKI1 246 aaKnown RBP11.59□□□□□ -0.55
MBD1-207ENST00000398488 ZNF709Q8N972 641 aa11.59□□□□□ -0.55
MBD1-207ENST00000398488 INO80EQ8NBZ0 244 aaPredicted RBP11.59□□□□□ -0.55
MBD1-207ENST00000398488 GATAD1Q8WUU5 269 aa11.59□□□□□ -0.55
MBD1-207ENST00000398488 FAM167A-AS1Q96KT0 104 aa11.59□□□□□ -0.55
MBD1-207ENST00000398488 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
MBD1-207ENST00000398488 PFDN5Q99471 154 aa11.59□□□□□ -0.55
MBD1-207ENST00000398488 A0A087X0K7 114 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 SLC17A3O00476 420 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 ISLRO14498 428 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 GIG44P09565 113 aaPredicted RBP11.58□□□□□ -0.56
MBD1-207ENST00000398488 IGLC2P0DOY2 106 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 ATF4P18848 351 aaPredicted RBP11.58□□□□□ -0.56
MBD1-207ENST00000398488 PSMB3P49720 205 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
MBD1-207ENST00000398488 FAM78BQ5VT40 261 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 TRPT1Q86TN4 253 aaKnown RBP11.58□□□□□ -0.56
MBD1-207ENST00000398488 HSD17B11Q8NBQ5 300 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 RCHY1Q96PM5 261 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 SLC25A2Q9BXI2 301 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 CYTL1Q9NRR1 136 aa11.58□□□□□ -0.56
MBD1-207ENST00000398488 C17orf112F2Z3M2 114 aa11.57□□□□□ -0.56
MBD1-207ENST00000398488 PYYP10082 97 aa11.57□□□□□ -0.56
MBD1-207ENST00000398488 S100A7P31151 101 aa11.57□□□□□ -0.56
MBD1-207ENST00000398488 SH3BGRL3Q9H299 93 aa11.57□□□□□ -0.56
MBD1-207ENST00000398488 ZNF586Q9NXT0 402 aa11.57□□□□□ -0.56
MBD1-207ENST00000398488 U3KQK5 164 aa11.57□□□□□ -0.56
MBD1-207ENST00000398488 H3BMM0 161 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 CXCL2P19875 107 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 ATP6V0CP27449 155 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 ID1P41134 155 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 CD300CQ08708 224 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 BPIFA4PQ86YQ2 179 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 SAT2Q96F10 170 aaPredicted RBP11.56□□□□□ -0.56
MBD1-207ENST00000398488 ZNF503Q96F45 646 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 MFFQ9GZY8 342 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 STAB2Q8WWQ8 2551 aa11.56□□□□□ -0.56
MBD1-207ENST00000398488 C4BPBP20851 252 aa11.55□□□□□ -0.56
MBD1-207ENST00000398488 MEOX2P50222 304 aa11.55□□□□□ -0.56
MBD1-207ENST00000398488 RAB2AP61019 212 aa11.55□□□□□ -0.56
MBD1-207ENST00000398488 S100A7AQ86SG5 101 aa11.55□□□□□ -0.56
MBD1-207ENST00000398488 STHQ8IWL8 128 aa11.55□□□□□ -0.56
MBD1-207ENST00000398488 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms