RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GNG13Q9P2W3 67 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 ZNF257Q9Y2Q1 563 aa5.34□□□□□ -1.55
TM9SF4-202ENST00000398022 A0A0J9YW62 118 aa5.34□□□□□ -1.56
TM9SF4-202ENST00000398022 ZFP92A6NM28 416 aa5.34□□□□□ -1.56
TM9SF4-202ENST00000398022 VCYO14598 125 aa5.34□□□□□ -1.56
TM9SF4-202ENST00000398022 Q6ZS49 121 aa5.34□□□□□ -1.56
TM9SF4-202ENST00000398022 GAPTQ8N292 157 aa5.34□□□□□ -1.56
TM9SF4-202ENST00000398022 NBASA2RRP1 2371 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 IGKV1-12A0A0C4DH73 117 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 IGKV1D-12P01611 117 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 CCL3P10147 92 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 PFN2P35080 140 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 CCL20P78556 96 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 ICAM4Q14773 271 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 CEACAM16Q2WEN9 425 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 C2orf48Q96LS8 159 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 C20orf78Q9BR46 151 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 TMEM191AQ9H0A3 160 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 TRAV1-1A0A0B4J248 108 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 CEBPZOSA8MTT3 80 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 H3BUT2 72 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 P01737 135 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 SPINK2P20155 84 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 SLC35E4Q6ICL7 350 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 CLDND2Q8NHS1 167 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 PIFOQ8TCI5 191 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 IGF2RP11717 2491 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 ADMP35318 185 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 OPRK1P41145 380 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 KRTDAPP60985 99 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 PRIMA1Q86XR5 153 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 OR4X2Q8NGF9 303 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF665Q9H7R5 613 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 WDR83OSQ9Y284 106 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 CRYBG3Q68DQ2 2970 aa5.33□□□□□ -1.56
TM9SF4-202ENST00000398022 IGHV5-10-1A0A0J9YXX1 117 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 BCL2P10415 239 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 NMSQ5H8A3 153 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 GUSBP11Q6P575 273 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 IGFL2Q6UWQ7 119 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 TMEM14EPQ6UXP3 125 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 ATOH7Q8N100 152 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 SIGLECL1Q8N7X8 197 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 PRR26Q8N8Z3 221 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF837Q96EG3 531 aaPredicted RBP5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 C21orf62Q9NYP8 219 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 CISD1Q9NZ45 108 aaKnown RBP5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 TRAV9-2A0A087WT02 112 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 SNCGO76070 127 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 FGF12P61328 243 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 PPP1CBP62140 327 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF818PQ6ZRF7 136 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 SMIM7Q9BQ49 75 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF253O75346 499 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 SLC25A5P05141 298 aaKnown RBP5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 PATE4P0C8F1 98 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 FGF6P10767 208 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 DUTP33316 252 aaKnown RBP5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 NMUP48645 174 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 SERF2P84101 59 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 LINC00596Q86U02 117 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 SRXN1Q9BYN0 137 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 C11orf1Q9H5F2 150 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 CCL28Q9NRJ3 127 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 TRAPPC1Q9Y5R8 145 aa5.32□□□□□ -1.56
TM9SF4-202ENST00000398022 IGHV1-45A0A0A0MS14 117 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 C17orf112F2Z3M2 114 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 NXPH3O95157 252 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 NTF4P34130 210 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 UBE2E1P51965 193 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 GNB2P62879 340 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 ASPHD1Q5U4P2 390 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 OR51H1Q8NH63 302 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 UBE2E2Q96LR5 201 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 S1PR3Q99500 378 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 M0R1B8 84 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 SPRY3O43610 288 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 MRPL33O75394 65 aaKnown RBP5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 FOLR3P41439 243 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 MSMO1Q15800 293 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 ZCCHC24Q8N2G6 241 aaKnown RBP5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 OR2T10Q8NGZ9 312 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 SSMEM1Q8WWF3 244 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 SLC39A9Q9NUM3 307 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF835Q9Y2P0 537 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 OR2W1Q9Y3N9 320 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 PYGO1Q9Y3Y4 419 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 FAM240AA0A1B0GVK7 77 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 C5orf49A4QMS7 147 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 FAM90A26D6RGX4 464 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 H3BP45 60 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 SYNGR2O43760 224 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 NAPSAO96009 420 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 ZNF134P52741 427 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 Q8N976 141 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 ZC2HC1AQ96GY0 325 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 IMMP1LQ96LU5 166 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 VGLL1Q99990 258 aa5.31□□□□□ -1.56
TM9SF4-202ENST00000398022 TMEM147Q9BVK8 224 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms