RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 DAD1P61803 113 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 ORMDL2Q53FV1 153 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 LURAP1LQ8IV03 231 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 C14orf178Q8N769 122 aaPredicted RBP9.22□□□□□ -0.93
TTC28-201ENST00000397906 JPT2Q9H910 190 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 G3V318 75 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 PARD6GQ9BYG4 376 aaPredicted RBP9.22□□□□□ -0.93
TTC28-201ENST00000397906 FOXL1Q12952 345 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 GATA3P23771 443 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 UBE2E1P51965 193 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 KNCNA6PVL3 124 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 A0A1W2PRE2 83 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 NAPSAO96009 420 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 D6R8Y8 96 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 BTCP35070 178 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 KLK9Q9UKQ9 250 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 GATD1Q8NB37 220 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 PHF3Q92576 2039 aaKnown RBP9.22□□□□□ -0.93
TTC28-201ENST00000397906 DDTP30046 118 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 MLANAQ16655 118 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 REG4Q9BYZ8 158 aa9.22□□□□□ -0.93
TTC28-201ENST00000397906 Q6P435 159 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 LAGE3Q14657 143 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 SPINK13Q1W4C9 94 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 IGHV2-70DA0A0C4DH43 119 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 PLXND1Q9Y4D7 1925 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 A0A096LPF7 62 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 TNFSF13O75888 250 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 DERL1Q9BUN8 251 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 PTPRDP23468 1912 aa9.21□□□□□ -0.93
TTC28-201ENST00000397906 HELZP42694 1942 aaKnown RBP9.21□□□□□ -0.94
TTC28-201ENST00000397906 DPM2O94777 84 aa9.21□□□□□ -0.94
TTC28-201ENST00000397906 C9orf139Q6ZV77 190 aa9.21□□□□□ -0.94
TTC28-201ENST00000397906 GGTLC1Q9BX51 225 aa9.21□□□□□ -0.94
TTC28-201ENST00000397906 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.21□□□□□ -0.94
TTC28-201ENST00000397906 GRNP28799 593 aaKnown RBP9.21□□□□□ -0.94
TTC28-201ENST00000397906 PAX4O43316 350 aa9.21□□□□□ -0.94
TTC28-201ENST00000397906 PRTN3P24158 256 aa9.21□□□□□ -0.94
TTC28-201ENST00000397906 TCF15Q12870 199 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 RFNGQ9Y644 331 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 CDK2AP2O75956 126 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 TOMM40O96008 361 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 TRGV9Q99603 122 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 DTX1Q86Y01 620 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 RNF5Q99942 180 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 IGKCP01834 107 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 CEP250Q9BV73 2442 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 PSG3Q16557 428 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 C6orf226Q5I0X4 101 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 FAM169BQ8N8A8 192 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 TANC1Q9C0D5 1861 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 E9PQ18 207 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 IGKV1-5P01602 117 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 IGFL3Q6UXB1 125 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 PLNP26678 52 aa9.2□□□□□ -0.94
TTC28-201ENST00000397906 AKAP6Q13023 2319 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 CNOT1A5YKK6 2376 aaKnown RBP9.19□□□□□ -0.94
TTC28-201ENST00000397906 TSC2P49815 1807 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 CGB7P0DN87 165 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 SSBP2P81877 361 aaPredicted RBP9.19□□□□□ -0.94
TTC28-201ENST00000397906 LY6G6FQ5SQ64 297 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 DMRTC2Q8IXT2 367 aaPredicted RBP9.19□□□□□ -0.94
TTC28-201ENST00000397906 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 IFITM2Q01629 132 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 A0A1B0GWB2 263 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 H0YIZ8 118 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 CSTL1Q9H114 145 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 ID3Q02535 119 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 NHP2Q9NX24 153 aaKnown RBP9.19□□□□□ -0.94
TTC28-201ENST00000397906 TEX43Q6ZNM6 134 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 NIT1Q86X76 327 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 ZMAT4Q9H898 229 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 K7EM74 188 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 CFHR2P36980 270 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 INS-IGF2F8WCM5 200 aa9.19□□□□□ -0.94
TTC28-201ENST00000397906 NDUFS7O75251 213 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 NRGNQ92686 78 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 FBLN5Q9UBX5 448 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 PAX9P55771 341 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 FAM120AOSQ5T036 256 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 TSKUQ8WUA8 353 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 WDR83OSQ9Y284 106 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 SMKR1H3BMG3 65 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 ATP5L2Q7Z4Y8 100 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 NTF4P34130 210 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 NRN1Q9NPD7 142 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 OSTCQ9NRP0 149 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 DIDO1Q9BTC0 2240 aaKnown RBP9.18□□□□□ -0.94
TTC28-201ENST00000397906 SS18Q15532 418 aa9.18□□□□□ -0.94
TTC28-201ENST00000397906 GAGE12JA6NER3 117 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 GAGE1Q13065 139 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 GAGE4Q13068 117 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 GAGE5Q13069 117 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 GAGE13Q4V321 117 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 GVINP1Q7Z2Y8 2422 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 TCTEX1D4Q5JR98 221 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 RLFQ13129 1914 aa9.17□□□□□ -0.94
TTC28-201ENST00000397906 DOCK7Q96N67 2140 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms