RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 DUX5Q96PT3 197 aa15.14■□□□□ 0.01
PDLIM2-204ENST00000397760 OSTCQ9NRP0 149 aa15.14■□□□□ 0.01
PDLIM2-204ENST00000397760 G3V318 75 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 ESDP10768 282 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 LBHQ53QV2 105 aaPredicted RBP15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 TMEM86BQ8N661 226 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 ZNF503Q96F45 646 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 C14orf144Q96I85 54 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 CDC42EP3Q9UKI2 254 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 PSMB11A5LHX3 300 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 SRD5A1P18405 259 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 CRIP2P52943 208 aaPredicted RBP15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 FAM110DQ8TAY7 271 aaPredicted RBP15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 LINC00527Q9UJ94 153 aa15.13■□□□□ 0.01
PDLIM2-204ENST00000397760 SONP18583 2426 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 IGHV3-48P01763 117 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 MT-ND6P03923 174 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 IGF1P05019 195 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 TIGITQ495A1 244 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 ETFRF1Q6IPR1 90 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 Q71RC1 249 aaPredicted RBP15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 OR1L4Q8NGR5 311 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 OR2T6Q8NHC8 308 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 FANCD2OSQ96PS1 177 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 V9GYV3 84 aa15.12■□□□□ 0.01
PDLIM2-204ENST00000397760 IGHV3-21A0A0B4J1V1 117 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 TRAV41A0A0B4J266 112 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 ISLRO14498 428 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 OR7C2O60412 319 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 ADMP35318 185 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 ERVFC1-1P60608 527 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 PAFAH1B2P68402 229 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 CENPWQ5EE01 88 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 GNB1LQ9BYB4 327 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 GSX1Q9H4S2 264 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 DNAJC4Q9NNZ3 241 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 MXRA5Q9NR99 2828 aa15.11■□□□□ 0.01
PDLIM2-204ENST00000397760 IGLV11-55A0A075B6I3 123 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 CRYBB3P26998 211 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 TAS2R60P59551 318 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 A8MWP6 167 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 I3L2K1 104 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 C19orf54Q5BKX5 351 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 WDR73Q6P4I2 378 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 THAP8Q8NA92 274 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 NPFFR1Q9GZQ6 430 aa15.1■□□□□ 0.01
PDLIM2-204ENST00000397760 DNAJC9-AS1A6NH13 148 aa15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 Q0VG73 95 aa15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 ZNF664Q8N3J9 261 aa15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 LINC00469Q8N7U9 141 aa15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 NPIPB3Q92617 1050 aa15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 FAM167A-AS1Q96KT0 104 aa15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 PRSS22Q9GZN4 317 aa15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 ZNF355PQ9NSJ1 428 aa15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 MRPL36Q9P0J6 103 aaKnown RBP15.09■□□□□ 0.01
PDLIM2-204ENST00000397760 GGTLC3B5MD39 225 aa15.08■□□□□ 0.01
PDLIM2-204ENST00000397760 K7EIM0 57 aa15.08■□□□□ 0.01
PDLIM2-204ENST00000397760 RANP62826 216 aaKnown RBP15.08■□□□□ 0.01
PDLIM2-204ENST00000397760 MRPL18Q9H0U6 180 aaKnown RBP15.08■□□□□ 0.01
PDLIM2-204ENST00000397760 THYN1Q9P016 225 aa15.08■□□□□ 0.01
PDLIM2-204ENST00000397760 TCRBV4S1A1TA0A5B7 111 aa15.08■□□□□ 0
PDLIM2-204ENST00000397760 INAFM1C9JVW0 142 aa15.08■□□□□ 0
PDLIM2-204ENST00000397760 SLC17A3O00476 420 aa15.08■□□□□ 0
PDLIM2-204ENST00000397760 OR2J3O76001 311 aa15.08■□□□□ 0
PDLIM2-204ENST00000397760 RAB4BP61018 213 aa15.08■□□□□ 0
PDLIM2-204ENST00000397760 PRO1933Q9H354 126 aa15.08■□□□□ 0
PDLIM2-204ENST00000397760 ESM1Q9NQ30 184 aa15.08■□□□□ 0
PDLIM2-204ENST00000397760 CYSRT1A8MQ03 144 aa15.07■□□□□ 0
PDLIM2-204ENST00000397760 CRISP2P16562 243 aa15.07■□□□□ 0
PDLIM2-204ENST00000397760 TPPP2P59282 170 aa15.07■□□□□ 0
PDLIM2-204ENST00000397760 CMTM2Q8TAZ6 248 aa15.07■□□□□ 0
PDLIM2-204ENST00000397760 IGF2BP2-AS1Q96M15 143 aa15.07■□□□□ 0
PDLIM2-204ENST00000397760 NDUFAF3Q9BU61 184 aa15.07■□□□□ 0
PDLIM2-204ENST00000397760 SLC25A2Q9BXI2 301 aa15.07■□□□□ 0
PDLIM2-204ENST00000397760 HIVEP2P31629 2446 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 ZNF705GA8MUZ8 300 aaPredicted RBP15.06■□□□□ 0
PDLIM2-204ENST00000397760 NDUFB8O95169 186 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 GATA2P23769 480 aaPredicted RBP15.06■□□□□ 0
PDLIM2-204ENST00000397760 SUMO1P63165 101 aaKnown RBP15.06■□□□□ 0
PDLIM2-204ENST00000397760 KLK9Q2XQG4 91 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 TMEM95Q3KNT9 176 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 TMEM256Q8N2U0 113 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 TMEM116Q8NCL8 245 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 STXBP6Q8NFX7 210 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 ZNF418Q8TF45 676 aaPredicted RBP15.06■□□□□ 0
PDLIM2-204ENST00000397760 ZNF702PQ9H963 129 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 FBXL7Q9UJT9 491 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 KLK9Q9UKQ9 250 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 COX7A2P2O60397 106 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 CBLN1P23435 193 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 MS4A10Q96PG2 267 aa15.06■□□□□ 0
PDLIM2-204ENST00000397760 IGLV2-8P01709 118 aa15.05■□□□□ -0
PDLIM2-204ENST00000397760 PPIFP30405 207 aaKnown RBP15.05■□□□□ -0
PDLIM2-204ENST00000397760 UBE2L3P68036 154 aaKnown RBP15.05■□□□□ -0
PDLIM2-204ENST00000397760 C10orf113Q5VZT2 155 aa15.05■□□□□ -0
PDLIM2-204ENST00000397760 ZNF580Q9UK33 172 aa15.05■□□□□ -0
PDLIM2-204ENST00000397760 SMIM27A0A1W2PRY6 76 aa15.04■□□□□ -0
PDLIM2-204ENST00000397760 RHOGP84095 191 aa15.04■□□□□ -0
PDLIM2-204ENST00000397760 OR5I1Q13606 314 aa15.04■□□□□ -0
PDLIM2-204ENST00000397760 RASL11AQ6T310 242 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms