RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 RPEL1Q2QD12 228 aa10.14□□□□□ -0.79
SEC13-209ENST00000397117 KHDC3LQ587J8 217 aa10.14□□□□□ -0.79
SEC13-209ENST00000397117 C20orf24Q9BUV8 137 aa10.14□□□□□ -0.79
SEC13-209ENST00000397117 SLC25A39Q9BZJ4 359 aaPredicted RBP10.14□□□□□ -0.79
SEC13-209ENST00000397117 MRPL27Q9P0M9 148 aaKnown RBP10.14□□□□□ -0.79
SEC13-209ENST00000397117 HSPB1P04792 205 aaKnown RBP10.13□□□□□ -0.79
SEC13-209ENST00000397117 STAG3L2P0CL84 134 aa10.13□□□□□ -0.79
SEC13-209ENST00000397117 STAG3L3P0CL85 134 aa10.13□□□□□ -0.79
SEC13-209ENST00000397117 ARL14EPLP0DKL9 152 aa10.13□□□□□ -0.79
SEC13-209ENST00000397117 FAM106AQ4KMX7 169 aa10.13□□□□□ -0.79
SEC13-209ENST00000397117 UQCC3Q6UW78 93 aa10.13□□□□□ -0.79
SEC13-209ENST00000397117 KLHL30-AS1Q8NEE0 82 aa10.13□□□□□ -0.79
SEC13-209ENST00000397117 METTL26Q96S19 204 aa10.13□□□□□ -0.79
SEC13-209ENST00000397117 ZFAND3Q9H8U3 227 aa10.13□□□□□ -0.79
SEC13-209ENST00000397117 TMA7Q9Y2S6 64 aaKnown RBP10.13□□□□□ -0.79
SEC13-209ENST00000397117 TSSC4Q9Y5U2 329 aaPredicted RBP10.13□□□□□ -0.79
SEC13-209ENST00000397117 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
SEC13-209ENST00000397117 ZNF320A2RRD8 509 aa10.12□□□□□ -0.79
SEC13-209ENST00000397117 OR7C2O60412 319 aa10.12□□□□□ -0.79
SEC13-209ENST00000397117 CD33P20138 364 aa10.12□□□□□ -0.79
SEC13-209ENST00000397117 PQLC2Q6ZP29 291 aa10.12□□□□□ -0.79
SEC13-209ENST00000397117 DPF1Q92782 380 aa10.12□□□□□ -0.79
SEC13-209ENST00000397117 SHANK2-AS3Q9BTD1 123 aa10.12□□□□□ -0.79
SEC13-209ENST00000397117 RNF24Q9Y225 148 aa10.12□□□□□ -0.79
SEC13-209ENST00000397117 CCL20P78556 96 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 MORN5Q5VZ52 161 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 C18orf65Q6ZTR6 163 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 GPHB5Q86YW7 130 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 SCRT1Q9BWW7 348 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 SLC25A2Q9BXI2 301 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 IGHV4OR15-8A0A075B7B6 117 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 A0A087WW49 117 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 A0A1W2PRX2 142 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 H3BRN7 92 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 ZNF207O43670 478 aaKnown RBP10.11□□□□□ -0.79
SEC13-209ENST00000397117 IFNA1P01562 189 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 NPPCP23582 126 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 PPT1P50897 306 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 DEFB136Q30KP8 78 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 LEMD1Q68G75 181 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 TMEM190Q8WZ59 177 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 NARS2Q96I59 477 aaKnown RBP10.11□□□□□ -0.79
SEC13-209ENST00000397117 ZNF414Q96IQ9 312 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 PAXXQ9BUH6 204 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 TMPRSS5Q9H3S3 457 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 GNG13Q9P2W3 67 aa10.11□□□□□ -0.79
SEC13-209ENST00000397117 ZNF98A6NK75 572 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 LINC01619G3V211 115 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 GCHFRP30047 84 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 PSMB3P49720 205 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 SRSF3P84103 164 aaKnown RBP10.1□□□□□ -0.79
SEC13-209ENST00000397117 DEFB121Q5J5C9 76 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 UNQ9165/PRO28630Q6UXU0 137 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 OR11H1Q8NG94 326 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 OR1N2Q8NGR9 330 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 FAM167A-AS1Q96KT0 104 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 EIF5A2Q9GZV4 153 aaKnown RBP10.1□□□□□ -0.79
SEC13-209ENST00000397117 OR51M1Q9H341 326 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 TMEM167BQ9NRX6 74 aa10.1□□□□□ -0.79
SEC13-209ENST00000397117 CD5P06127 495 aa10.09□□□□□ -0.79
SEC13-209ENST00000397117 HOXD3P31249 432 aaPredicted RBP10.09□□□□□ -0.79
SEC13-209ENST00000397117 UBE2L3P68036 154 aaKnown RBP10.09□□□□□ -0.79
SEC13-209ENST00000397117 C8orf86Q6ZUL3 223 aa10.09□□□□□ -0.79
SEC13-209ENST00000397117 BPIFA4PQ86YQ2 179 aa10.09□□□□□ -0.79
SEC13-209ENST00000397117 WWC2-AS2Q96NR7 200 aa10.09□□□□□ -0.79
SEC13-209ENST00000397117 UFC1Q9Y3C8 167 aa10.09□□□□□ -0.79
SEC13-209ENST00000397117 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
SEC13-209ENST00000397117 OR10J4P0C629 311 aa10.08□□□□□ -0.8
SEC13-209ENST00000397117 CRYBB3P26998 211 aa10.08□□□□□ -0.8
SEC13-209ENST00000397117 GUK1Q16774 197 aa10.08□□□□□ -0.8
SEC13-209ENST00000397117 HAGHQ16775 308 aa10.08□□□□□ -0.8
SEC13-209ENST00000397117 OR8I2Q8N0Y5 310 aa10.08□□□□□ -0.8
SEC13-209ENST00000397117 MANBALQ9NQG1 85 aa10.08□□□□□ -0.8
SEC13-209ENST00000397117 DAZ1Q9NQZ3 744 aaKnown RBP10.08□□□□□ -0.8
SEC13-209ENST00000397117 RBFOX3A6NFN3 312 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 PYYP10082 97 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 RPL7P18124 248 aaKnown RBP10.07□□□□□ -0.8
SEC13-209ENST00000397117 TAGLN2P37802 199 aaKnown RBP10.07□□□□□ -0.8
SEC13-209ENST00000397117 SYNJ2BPP57105 145 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 EGFEM1PQ0D2K5 195 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 PMS2P11Q13670 270 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 ZNF503Q96F45 646 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 GRAMD2BQ96HH9 432 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 IGHV3-49A0A0A0MS15 119 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 A0A1W2PS18 150 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 K7EMT4 169 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 LGALS9O00182 355 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 BUB3O43684 328 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 BCL2P10415 239 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 GP9P14770 177 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 SLURP1P55000 103 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 UBE2G2P60604 165 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 PEA15Q15121 130 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 TM4SF20Q53R12 229 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 C10orf91Q5T1B1 145 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 C1orf194Q5T5A4 169 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 RAX2Q96IS3 184 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms