RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 HBG1P69891 147 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 HBG2P69892 147 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 CSNK1G2-AS1Q8NCQ2 148 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 SHANK2-AS3Q9BTD1 123 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 RSG1Q9BU20 258 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 SLC25A32Q9H2D1 315 aa10.15□□□□□ -0.78
SEC13-204ENST00000397099 SMIM9A6NGZ8 99 aa10.14□□□□□ -0.79
SEC13-204ENST00000397099 C11orf94C9JXX5 98 aa10.14□□□□□ -0.79
SEC13-204ENST00000397099 OR5G3P0C626 314 aa10.14□□□□□ -0.79
SEC13-204ENST00000397099 C4BPBP20851 252 aa10.14□□□□□ -0.79
SEC13-204ENST00000397099 GATA2P23769 480 aaPredicted RBP10.14□□□□□ -0.79
SEC13-204ENST00000397099 CAV2P51636 162 aa10.14□□□□□ -0.79
SEC13-204ENST00000397099 CYCSP99999 105 aaKnown RBP10.14□□□□□ -0.79
SEC13-204ENST00000397099 STX12Q86Y82 276 aa10.14□□□□□ -0.79
SEC13-204ENST00000397099 Q8NAQ8 132 aa10.14□□□□□ -0.79
SEC13-204ENST00000397099 PHLDA1Q8WV24 401 aaPredicted RBP10.14□□□□□ -0.79
SEC13-204ENST00000397099 ARL6Q9H0F7 186 aa10.14□□□□□ -0.79
SEC13-204ENST00000397099 LYRM2Q9NU23 88 aaPredicted RBP10.14□□□□□ -0.79
SEC13-204ENST00000397099 LSM5Q9Y4Y9 91 aaKnown RBP10.14□□□□□ -0.79
SEC13-204ENST00000397099 AGPAT2O15120 278 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 DUSP14O95147 198 aaKnown RBP10.13□□□□□ -0.79
SEC13-204ENST00000397099 LY6G6CO95867 125 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 AMBPP02760 352 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 RLN2P04090 185 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 SULT1A1P50225 295 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 EWSR1Q01844 656 aaKnown RBP eCLIP10.13□□□□□ -0.79
SEC13-204ENST00000397099 SLC38A11Q08AI6 406 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 ATP6V1FQ16864 119 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 TMEM182Q6ZP80 229 aaPredicted RBP10.13□□□□□ -0.79
SEC13-204ENST00000397099 Q6ZRG5 221 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 NEU1Q99519 415 aa10.13□□□□□ -0.79
SEC13-204ENST00000397099 A0A087X0K7 114 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 A0A0J9YX75 114 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 TMEM189A5PLL7 270 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 CXCL2P19875 107 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 S100A10P60903 97 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 IL15RAQ13261 267 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 ARV1Q9H2C2 271 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 UQCC1Q9NVA1 299 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 CLEC5AQ9NY25 188 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 DOK5Q9P104 306 aa10.12□□□□□ -0.79
SEC13-204ENST00000397099 IGHV4-28A0A0C4DH34 117 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 TEX48A0A1B0GUV7 120 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 MPDU1O75352 247 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 CCNKO75909 580 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 CAMLGP49069 296 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 PSG9Q00887 426 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 ARL16Q0P5N6 197 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 VWC2Q2TAL6 325 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 ZNF705AQ6ZN79 300 aaPredicted RBP10.11□□□□□ -0.79
SEC13-204ENST00000397099 BPIFA4PQ86YQ2 179 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 OR4B1Q8NGF8 309 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 OR1L4Q8NGR5 311 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 CHAC2Q8WUX2 184 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 LINC00476Q8WZB0 136 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 PFDN5Q99471 154 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 MARVELD1Q9BSK0 173 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 SCRT1Q9BWW7 348 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 NMES1Q9C002 83 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 C11orf1Q9H5F2 150 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 XCL2Q9UBD3 114 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 X6R8D5 127 aa10.11□□□□□ -0.79
SEC13-204ENST00000397099 A8MTW9 85 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 INMT-MINDY4F8WBC2 141 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 COX7A2P2O60397 106 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 B2MP61769 119 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 RAB32Q13637 225 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 GDF5OSQ5U4N7 250 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 FAM78BQ5VT40 261 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 LINC00305Q7Z4B0 112 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 LRRC20Q8TCA0 184 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 C2CD4CQ8TF44 421 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 SLC25A31Q9H0C2 315 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 DNAJC4Q9NNZ3 241 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 WDR83OSQ9Y284 106 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 GOLT1BQ9Y3E0 138 aa10.1□□□□□ -0.79
SEC13-204ENST00000397099 ZNF705FA8MVS1 300 aaPredicted RBP10.09□□□□□ -0.79
SEC13-204ENST00000397099 CST7O76096 145 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 ZNF705DP0CH99 300 aaPredicted RBP10.09□□□□□ -0.79
SEC13-204ENST00000397099 ZNF705BP0CI00 300 aaPredicted RBP10.09□□□□□ -0.79
SEC13-204ENST00000397099 RPL29P47914 159 aaKnown RBP10.09□□□□□ -0.79
SEC13-204ENST00000397099 NANOS2P60321 138 aaKnown RBP10.09□□□□□ -0.79
SEC13-204ENST00000397099 FGL1Q08830 312 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 C10orf113Q5VZT2 155 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 LCN15Q6UWW0 184 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 NRARPQ7Z6K4 114 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 TMEM252Q8N6L7 170 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 UHRF2Q96PU4 802 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 MGST2Q99735 147 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 SLC50A1Q9BRV3 221 aa10.09□□□□□ -0.79
SEC13-204ENST00000397099 FAM24AA6NFZ4 105 aa10.08□□□□□ -0.8
SEC13-204ENST00000397099 E5RGE8 158 aa10.08□□□□□ -0.8
SEC13-204ENST00000397099 PET100P0DJ07 73 aa10.08□□□□□ -0.8
SEC13-204ENST00000397099 RBMY1A1P0DJD3 496 aaKnown RBP10.08□□□□□ -0.8
SEC13-204ENST00000397099 RBMY1CP0DJD4 496 aa10.08□□□□□ -0.8
SEC13-204ENST00000397099 BAXQ07812 192 aa10.08□□□□□ -0.8
SEC13-204ENST00000397099 RBMY1FQ15415 496 aaKnown RBP10.08□□□□□ -0.8
SEC13-204ENST00000397099 GUK1Q16774 197 aa10.08□□□□□ -0.8
SEC13-204ENST00000397099 PATE2Q6UY27 113 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms