RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 C8orf46Q8TAG6 207 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 CHCHD1Q96BP2 118 aaKnown RBP11.03□□□□□ -0.64
NUP98-204ENST00000397004 SMIM12Q96EX1 92 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 ST20Q9HBF5 79 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 RHOGP84095 191 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 C1orf185Q5T7R7 199 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 PRNTQ86SH4 94 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 TMEM186Q96B77 213 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 VPS13CQ709C8 3753 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 BSPH1Q075Z2 132 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 VSTM2AQ8TAG5 236 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 IGHV1-8P0DP01 117 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 PLP1P60201 277 aa11.03□□□□□ -0.64
NUP98-204ENST00000397004 HAX1O00165 279 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 IGKV1-17P01599 117 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 TMEM155Q4W5P6 130 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 SLC25A39Q9BZJ4 359 aaPredicted RBP11.02□□□□□ -0.65
NUP98-204ENST00000397004 CELSR1Q9NYQ6 3014 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 ARHGAP32A7KAX9 2087 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 PPIAL4EA0A075B759 164 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 PPIAL4DF5H284 164 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 PPIAL4FP0DN26 164 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 TNFRSF1AP19438 455 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.65
NUP98-204ENST00000397004 ZNF575Q86XF7 245 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 DEFB125Q8N687 156 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 GFRA4Q9GZZ7 299 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 SIGLEC9Q9Y336 463 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 SELENOKQ9Y6D0 94 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 CHRDL1Q9BU40 450 aa11.02□□□□□ -0.65
NUP98-204ENST00000397004 TIMM8BQ9Y5J9 83 aaPredicted RBP11.02□□□□□ -0.65
NUP98-204ENST00000397004 C22orf15Q8WYQ4 148 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 RNF24Q9Y225 148 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 TRAV8-6A0A0B4J262 113 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 I3L2K1 104 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 COL8A1P27658 744 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 FXYD7P58549 80 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 LYZP61626 148 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 ANKRD39Q53RE8 183 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 WFDC8Q8IUA0 241 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 A0A0G2JNJ9 132 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 STXBP6Q8NFX7 210 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 Q9UFV3 132 aa11.01□□□□□ -0.65
NUP98-204ENST00000397004 CDKN1BP46527 198 aa11□□□□□ -0.65
NUP98-204ENST00000397004 LINC01545Q5VT33 79 aa11□□□□□ -0.65
NUP98-204ENST00000397004 C8orf31Q8N9H6 132 aa11□□□□□ -0.65
NUP98-204ENST00000397004 AMMECR1LQ6DCA0 310 aa11□□□□□ -0.65
NUP98-204ENST00000397004 ZNF747Q9BV97 191 aa11□□□□□ -0.65
NUP98-204ENST00000397004 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
NUP98-204ENST00000397004 M0R3E3 92 aa11□□□□□ -0.65
NUP98-204ENST00000397004 IGLV1-47P01700 117 aa11□□□□□ -0.65
NUP98-204ENST00000397004 RPL27AP46776 148 aaKnown RBP11□□□□□ -0.65
NUP98-204ENST00000397004 VMA21Q3ZAQ7 101 aa11□□□□□ -0.65
NUP98-204ENST00000397004 FAM71F2Q6NXP2 309 aa11□□□□□ -0.65
NUP98-204ENST00000397004 SLC25A34Q6PIV7 304 aa11□□□□□ -0.65
NUP98-204ENST00000397004 TMEM133Q9H2Q1 129 aa11□□□□□ -0.65
NUP98-204ENST00000397004 S4R3C0 116 aa11□□□□□ -0.65
NUP98-204ENST00000397004 CBY3A6NI87 242 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 MRPS12O15235 138 aaKnown RBP10.99□□□□□ -0.65
NUP98-204ENST00000397004 FGF6P10767 208 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 Q6ZS92 163 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 SRSF12Q8WXF0 261 aaKnown RBP10.99□□□□□ -0.65
NUP98-204ENST00000397004 COL25A1Q9BXS0 654 aaPredicted RBP10.99□□□□□ -0.65
NUP98-204ENST00000397004 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 LYNX1G3V0Z9 82 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 LYNX1P0DP58 116 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 VAMP3Q15836 100 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 C8orf49Q96NF6 230 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 TRAV30A0A087WSZ9 112 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 TCTAP57738 103 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 SIGLEC15Q6ZMC9 328 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
NUP98-204ENST00000397004 OTORQ9NRC9 128 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 SOX21Q9Y651 276 aaPredicted RBP10.98□□□□□ -0.65
NUP98-204ENST00000397004 CHEK1O14757 476 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 NDUFB3O43676 98 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 LIPFP07098 398 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 PSG9Q00887 426 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 HIGD1AQ9Y241 93 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 ACACAQ13085 2346 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 IFI27P40305 119 aaPredicted RBP10.98□□□□□ -0.65
NUP98-204ENST00000397004 LGALS7P47929 136 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 IGFL3Q6UXB1 125 aa10.98□□□□□ -0.65
NUP98-204ENST00000397004 TRBV19A0A075B6N1 114 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.97□□□□□ -0.65
NUP98-204ENST00000397004 FAM231BA6NCW3 169 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 K7EIM0 57 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 DAZAP1Q96EP5 407 aaKnown RBP10.97□□□□□ -0.65
NUP98-204ENST00000397004 PSMG3-AS1Q96PY0 264 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 IGHV1-3A0A0C4DH29 117 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 KLF17Q5JT82 389 aaPredicted RBP10.97□□□□□ -0.65
NUP98-204ENST00000397004 TMEM108Q6UXF1 575 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 PPP1R27Q86WC6 154 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 A0A1W2PRD5 423 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 A0A1W2PRF3 423 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 A0A1W2PRM7 423 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 TMEM213A2RRL7 107 aa10.97□□□□□ -0.65
NUP98-204ENST00000397004 PAX8Q06710 450 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms