RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 TPSG1Q9NRR2 321 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 TMEM14CQ9P0S9 112 aa10.62□□□□□ -0.71
TRIM40-207ENST00000396581 ICE1Q9Y2F5 2266 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 DLX6P56179 175 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 LINC01545Q5VT33 79 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 TEX45Q8NA69 505 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 OR4C5Q8NGB2 326 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 DAZAP1Q96EP5 407 aaKnown RBP10.61□□□□□ -0.71
TRIM40-207ENST00000396581 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 TP73-AS1Q9UF72 201 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 SLC25A17O43808 307 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 PPBPP02775 128 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 CRYGBP07316 175 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 NEU4Q8WWR8 484 aaPredicted RBP10.61□□□□□ -0.71
TRIM40-207ENST00000396581 HSPB8Q9UJY1 196 aa10.61□□□□□ -0.71
TRIM40-207ENST00000396581 ROS1P08922 2347 aa10.6□□□□□ -0.71
TRIM40-207ENST00000396581 NUDT3O95989 172 aa10.6□□□□□ -0.71
TRIM40-207ENST00000396581 TMEM108Q6UXF1 575 aa10.6□□□□□ -0.71
TRIM40-207ENST00000396581 RITA1Q96K30 269 aa10.6□□□□□ -0.71
TRIM40-207ENST00000396581 RPH3ALQ9UNE2 315 aa10.6□□□□□ -0.71
TRIM40-207ENST00000396581 ACACBO00763 2458 aa10.6□□□□□ -0.71
TRIM40-207ENST00000396581 COL6A6A6NMZ7 2263 aa10.6□□□□□ -0.71
TRIM40-207ENST00000396581 RELNP78509 3460 aa10.6□□□□□ -0.71
TRIM40-207ENST00000396581 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.59□□□□□ -0.71
TRIM40-207ENST00000396581 ZNF785A8K8V0 405 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 C17orf100A8MU93 164 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 HSBP1L1C9JCN9 74 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 CHEK1O14757 476 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 THBDP07204 575 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 CCL8P80075 99 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 PRR31Q5SQ13 230 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 GSX1Q9H4S2 264 aaPredicted RBP10.59□□□□□ -0.71
TRIM40-207ENST00000396581 TMEM8BA6NDV4 472 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 CD5LO43866 347 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 COL8A1P27658 744 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 HIST1H1AQ02539 215 aaPredicted RBP10.59□□□□□ -0.71
TRIM40-207ENST00000396581 VAMP3Q15836 100 aa10.59□□□□□ -0.71
TRIM40-207ENST00000396581 TMEM178BH3BS89 294 aa10.58□□□□□ -0.72
TRIM40-207ENST00000396581 RPL27AP46776 148 aaKnown RBP10.58□□□□□ -0.72
TRIM40-207ENST00000396581 HCP5Q6MZN7 132 aa10.58□□□□□ -0.72
TRIM40-207ENST00000396581 NBEAQ8NFP9 2946 aa10.58□□□□□ -0.72
TRIM40-207ENST00000396581 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 MUC21A0A0G2JKD1 596 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 MUC21A0A140T8X8 626 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 PPIAL4FP0DN26 164 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 LY6DQ14210 128 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 MUC21Q5SSG8 566 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 LHFPL4Q7Z7J7 247 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
TRIM40-207ENST00000396581 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 PMCHL2Q9BQD1 86 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 TMUB1Q9BVT8 246 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 HIGD1AQ9Y241 93 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 A0A1B0GW15 77 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 CCL21O00585 134 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 IGLC1P0CG04 106 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 COX8AP10176 69 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 LOXP28300 417 aaPredicted RBP10.57□□□□□ -0.72
TRIM40-207ENST00000396581 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 TMEM155Q4W5P6 130 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 WFDC8Q8IUA0 241 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 DPF1Q92782 380 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 ZNF747Q9BV97 191 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 KAAG1Q9UBP8 84 aa10.57□□□□□ -0.72
TRIM40-207ENST00000396581 F11RQ9Y624 299 aaKnown RBP10.57□□□□□ -0.72
TRIM40-207ENST00000396581 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 A0A1B0GUT8 65 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 NDUFB3O43676 98 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 SLC25A39Q9BZJ4 359 aaPredicted RBP10.56□□□□□ -0.72
TRIM40-207ENST00000396581 CTSZQ9UBR2 303 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 ANKHD1Q8IWZ3 2542 aaKnown RBP10.56□□□□□ -0.72
TRIM40-207ENST00000396581 KALRNO60229 2985 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 TEX22C9J3V5 150 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 H3BTX0 84 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 PSG1P11464 419 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 ZNF138P52744 262 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 BSPH1Q075Z2 132 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 LYPD2Q6UXB3 125 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 C2orf91Q6ZV80 131 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 NGBQ9NPG2 151 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 SIGLEC9Q9Y336 463 aa10.56□□□□□ -0.72
TRIM40-207ENST00000396581 IGHV1-8P0DP01 117 aa10.55□□□□□ -0.72
TRIM40-207ENST00000396581 HTR1DP28221 377 aa10.55□□□□□ -0.72
TRIM40-207ENST00000396581 RIGQ13278 110 aa10.55□□□□□ -0.72
TRIM40-207ENST00000396581 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
TRIM40-207ENST00000396581 TNFRSF14Q92956 283 aa10.55□□□□□ -0.72
TRIM40-207ENST00000396581 CST9LQ9H4G1 147 aa10.55□□□□□ -0.72
TRIM40-207ENST00000396581 AP5S1Q9NUS5 200 aa10.55□□□□□ -0.72
TRIM40-207ENST00000396581 TOX4O94842 621 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 Q6AWC8 147 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 GOLT1AQ6ZVE7 132 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 Q71RC1 249 aaPredicted RBP10.54□□□□□ -0.72
TRIM40-207ENST00000396581 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 NAV3Q8IVL0 2385 aa10.54□□□□□ -0.72
TRIM40-207ENST00000396581 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms