RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ARPC5O15511 151 aa14.3□□□□□ -0.12
HOXA9-202ENST00000396345 ST6GAL2Q96JF0 529 aa14.3□□□□□ -0.12
HOXA9-202ENST00000396345 FAM110AQ9BQ89 295 aa14.3□□□□□ -0.12
HOXA9-202ENST00000396345 RSG1Q9BU20 258 aa14.3□□□□□ -0.12
HOXA9-202ENST00000396345 FRMD6-AS1P0C7T7 363 aa14.29□□□□□ -0.12
HOXA9-202ENST00000396345 RPL7P18124 248 aaKnown RBP14.29□□□□□ -0.12
HOXA9-202ENST00000396345 ZNF266Q14584 549 aa14.29□□□□□ -0.12
HOXA9-202ENST00000396345 FAM24BQ8N5W8 94 aa14.29□□□□□ -0.12
HOXA9-202ENST00000396345 MFFQ9GZY8 342 aa14.29□□□□□ -0.12
HOXA9-202ENST00000396345 SRD5A3Q9H8P0 318 aa14.29□□□□□ -0.12
HOXA9-202ENST00000396345 MAP6D1Q9H9H5 199 aa14.29□□□□□ -0.12
HOXA9-202ENST00000396345 OR11H4Q8NGC9 324 aa14.28□□□□□ -0.12
HOXA9-202ENST00000396345 GATAD1Q8WUU5 269 aa14.28□□□□□ -0.12
HOXA9-202ENST00000396345 HMSDA8MTL9 139 aa14.27□□□□□ -0.13
HOXA9-202ENST00000396345 ATF4P18848 351 aaPredicted RBP14.27□□□□□ -0.13
HOXA9-202ENST00000396345 DEFB131AP59861 70 aa14.27□□□□□ -0.13
HOXA9-202ENST00000396345 GCSAMLQ5JQS6 135 aa14.27□□□□□ -0.13
HOXA9-202ENST00000396345 APRG1Q8IVJ8 170 aa14.27□□□□□ -0.13
HOXA9-202ENST00000396345 B9D2Q9BPU9 175 aa14.27□□□□□ -0.13
HOXA9-202ENST00000396345 ZNF688P0C7X2 276 aa14.26□□□□□ -0.13
HOXA9-202ENST00000396345 FFAR4Q5NUL3 377 aa14.26□□□□□ -0.13
HOXA9-202ENST00000396345 MORN5Q5VZ52 161 aa14.26□□□□□ -0.13
HOXA9-202ENST00000396345 TCTE3Q8IZS6 198 aa14.26□□□□□ -0.13
HOXA9-202ENST00000396345 CITED4Q96RK1 184 aa14.26□□□□□ -0.13
HOXA9-202ENST00000396345 SEPSECSQ9HD40 501 aaKnown RBP14.26□□□□□ -0.13
HOXA9-202ENST00000396345 TIMM9Q9Y5J7 89 aa14.26□□□□□ -0.13
HOXA9-202ENST00000396345 TGP01266 2768 aa14.26□□□□□ -0.13
HOXA9-202ENST00000396345 BORCS7-ASMTA0A0B4J1R7 106 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 TRAV5A0A0B4J249 113 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 A0A1B0GVG6 124 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 ID1P41134 155 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 MEOX2P50222 304 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 SNRPD3P62318 126 aaKnown RBP14.25□□□□□ -0.13
HOXA9-202ENST00000396345 RPL7L1Q6DKI1 246 aaKnown RBP14.25□□□□□ -0.13
HOXA9-202ENST00000396345 AKAP14Q86UN6 197 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 BPIFA4PQ86YQ2 179 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 HSD17B11Q8NBQ5 300 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 C17orf77Q96MU5 243 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 RFNGQ9Y644 331 aa14.25□□□□□ -0.13
HOXA9-202ENST00000396345 RBMY1BA6NDE4 496 aaKnown RBP14.24□□□□□ -0.13
HOXA9-202ENST00000396345 RBMY1EA6NEQ0 496 aaKnown RBP14.24□□□□□ -0.13
HOXA9-202ENST00000396345 TAAR5O14804 337 aa14.24□□□□□ -0.13
HOXA9-202ENST00000396345 RBMY1DP0C7P1 496 aaKnown RBP14.24□□□□□ -0.13
HOXA9-202ENST00000396345 ZNF345Q14585 488 aa14.24□□□□□ -0.13
HOXA9-202ENST00000396345 ZNF124Q15973 351 aa14.24□□□□□ -0.13
HOXA9-202ENST00000396345 PSMG4Q5JS54 123 aa14.24□□□□□ -0.13
HOXA9-202ENST00000396345 FAM78BQ5VT40 261 aa14.24□□□□□ -0.13
HOXA9-202ENST00000396345 SAMD13Q5VXD3 122 aa14.24□□□□□ -0.13
HOXA9-202ENST00000396345 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.24□□□□□ -0.13
HOXA9-202ENST00000396345 ASCL2Q99929 193 aa14.24□□□□□ -0.13
HOXA9-202ENST00000396345 SOCS3O14543 225 aa14.23□□□□□ -0.13
HOXA9-202ENST00000396345 MRPS12O15235 138 aaKnown RBP14.23□□□□□ -0.13
HOXA9-202ENST00000396345 PSMB3P49720 205 aa14.23□□□□□ -0.13
HOXA9-202ENST00000396345 KCNRGQ8N5I3 272 aa14.23□□□□□ -0.13
HOXA9-202ENST00000396345 C16orf92Q96LL3 132 aa14.23□□□□□ -0.13
HOXA9-202ENST00000396345 A0A087X0K7 114 aa14.22□□□□□ -0.13
HOXA9-202ENST00000396345 A0A0D9SG52 128 aa14.22□□□□□ -0.13
HOXA9-202ENST00000396345 ISLRO14498 428 aa14.22□□□□□ -0.13
HOXA9-202ENST00000396345 ATP6V0CP27449 155 aa14.22□□□□□ -0.13
HOXA9-202ENST00000396345 ACOT6Q3I5F7 207 aaPredicted RBP14.22□□□□□ -0.13
HOXA9-202ENST00000396345 SPATA31B1PQ5VZV4 182 aa14.22□□□□□ -0.13
HOXA9-202ENST00000396345 LINC00322Q6ZN03 302 aaPredicted RBP14.22□□□□□ -0.13
HOXA9-202ENST00000396345 SBSPONQ8IVN8 264 aa14.22□□□□□ -0.13
HOXA9-202ENST00000396345 LINC00052Q96N35 136 aa14.22□□□□□ -0.13
HOXA9-202ENST00000396345 PSMG3Q9BT73 122 aaPredicted RBP14.22□□□□□ -0.13
HOXA9-202ENST00000396345 MRPL32Q9BYC8 188 aaKnown RBP14.22□□□□□ -0.13
HOXA9-202ENST00000396345 LOC102724200A0A096LPH7 203 aaPredicted RBP14.21□□□□□ -0.13
HOXA9-202ENST00000396345 JTBO76095 146 aa14.21□□□□□ -0.13
HOXA9-202ENST00000396345 CXCL2P19875 107 aa14.21□□□□□ -0.13
HOXA9-202ENST00000396345 MIR17HGQ75NE6 70 aa14.21□□□□□ -0.13
HOXA9-202ENST00000396345 ARPC5LQ9BPX5 153 aa14.21□□□□□ -0.13
HOXA9-202ENST00000396345 CYTL1Q9NRR1 136 aa14.21□□□□□ -0.13
HOXA9-202ENST00000396345 FUT9Q9Y231 359 aa14.21□□□□□ -0.13
HOXA9-202ENST00000396345 C1QBP02746 253 aa14.2□□□□□ -0.14
HOXA9-202ENST00000396345 SNRPCP09234 159 aaKnown RBP14.2□□□□□ -0.14
HOXA9-202ENST00000396345 RHOBP62745 196 aa14.2□□□□□ -0.14
HOXA9-202ENST00000396345 HAGHQ16775 308 aa14.2□□□□□ -0.14
HOXA9-202ENST00000396345 OR2G3Q8NGZ4 309 aa14.2□□□□□ -0.14
HOXA9-202ENST00000396345 LRRC20Q8TCA0 184 aa14.2□□□□□ -0.14
HOXA9-202ENST00000396345 GNPNAT1Q96EK6 184 aaPredicted RBP14.2□□□□□ -0.14
HOXA9-202ENST00000396345 KNCNA6PVL3 124 aa14.19□□□□□ -0.14
HOXA9-202ENST00000396345 RPL35AP18077 110 aaKnown RBP14.19□□□□□ -0.14
HOXA9-202ENST00000396345 M6PRP20645 277 aa14.19□□□□□ -0.14
HOXA9-202ENST00000396345 SERF2P84101 59 aa14.19□□□□□ -0.14
HOXA9-202ENST00000396345 LCN15Q6UWW0 184 aa14.19□□□□□ -0.14
HOXA9-202ENST00000396345 SLC25A2Q9BXI2 301 aa14.19□□□□□ -0.14
HOXA9-202ENST00000396345 SH3BGRL3Q9H299 93 aa14.19□□□□□ -0.14
HOXA9-202ENST00000396345 HRH4Q9H3N8 390 aa14.19□□□□□ -0.14
HOXA9-202ENST00000396345 TMEM14CQ9P0S9 112 aa14.19□□□□□ -0.14
HOXA9-202ENST00000396345 TRAV8-2A0A0B4J237 113 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 KANTRA0A1W2PQU2 76 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 H3BQ15 152 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 NHLRC4P0CG21 123 aaPredicted RBP14.18□□□□□ -0.14
HOXA9-202ENST00000396345 IGLC2P0DOY2 106 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 RAB2AP61019 212 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 IGFL4Q6B9Z1 124 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 TMUB2Q71RG4 321 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 STHQ8IWL8 128 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 OR10G4Q8NGN3 311 aa14.18□□□□□ -0.14
HOXA9-202ENST00000396345 OR10G9Q8NGN4 311 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms