RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RNF182Q8N6D2 247 aa14.77□□□□□ -0.05
TRAF4-203ENST00000394925 SCP2D1Q9UJQ7 156 aa14.77□□□□□ -0.05
TRAF4-203ENST00000394925 ORM2P19652 201 aa14.76□□□□□ -0.05
TRAF4-203ENST00000394925 GATA2P23769 480 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-203ENST00000394925 FGL1Q08830 312 aa14.76□□□□□ -0.05
TRAF4-203ENST00000394925 OR4D5Q8NGN0 318 aa14.76□□□□□ -0.05
TRAF4-203ENST00000394925 OR1B1Q8NGR6 318 aa14.76□□□□□ -0.05
TRAF4-203ENST00000394925 RNF141Q8WVD5 230 aa14.76□□□□□ -0.05
TRAF4-203ENST00000394925 SCGB3A2Q96PL1 93 aa14.76□□□□□ -0.05
TRAF4-203ENST00000394925 SLC25A39Q9BZJ4 359 aaPredicted RBP14.76□□□□□ -0.05
TRAF4-203ENST00000394925 SCRT2Q9NQ03 307 aa14.76□□□□□ -0.05
TRAF4-203ENST00000394925 SLC45A2Q9UMX9 530 aa14.76□□□□□ -0.05
TRAF4-203ENST00000394925 TRAV8-2A0A0B4J237 113 aa14.75□□□□□ -0.05
TRAF4-203ENST00000394925 CBY3A6NI87 242 aa14.75□□□□□ -0.05
TRAF4-203ENST00000394925 ANXA3P12429 323 aa14.75□□□□□ -0.05
TRAF4-203ENST00000394925 IL18Q14116 193 aa14.75□□□□□ -0.05
TRAF4-203ENST00000394925 CLINT1Q14677 625 aa14.75□□□□□ -0.05
TRAF4-203ENST00000394925 LINC01587Q99440 93 aa14.75□□□□□ -0.05
TRAF4-203ENST00000394925 ANKRD20A5PA0PJZ0 165 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 CTDSPLO15194 276 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 PITX3O75364 302 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 HTN1P15515 57 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 SRPXP78539 464 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 TMEM182Q6ZP80 229 aaPredicted RBP14.74□□□□□ -0.05
TRAF4-203ENST00000394925 SSX7Q7RTT5 188 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 ZNF738Q8NE65 137 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 BPIFCQ8NFQ6 507 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 GPR82Q96P67 336 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 TMEM147Q9BVK8 224 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 MCUBQ9NWR8 336 aa14.74□□□□□ -0.05
TRAF4-203ENST00000394925 BOLA2-SMG1P6H3BVE0 249 aa14.73□□□□□ -0.05
TRAF4-203ENST00000394925 DIRAS2Q96HU8 199 aa14.73□□□□□ -0.05
TRAF4-203ENST00000394925 RHOBP62745 196 aa14.72□□□□□ -0.05
TRAF4-203ENST00000394925 Q9H8V8 135 aa14.72□□□□□ -0.05
TRAF4-203ENST00000394925 S100A7P31151 101 aa14.71□□□□□ -0.05
TRAF4-203ENST00000394925 HIST1H1AQ02539 215 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-203ENST00000394925 PPP1R14DQ9NXH3 145 aa14.71□□□□□ -0.05
TRAF4-203ENST00000394925 TIMM8BQ9Y5J9 83 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-203ENST00000394925 PRSS46E5RG02 174 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 WRBO00258 174 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 MED6O75586 246 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 PRB4P10163 310 aaPredicted RBP14.7□□□□□ -0.06
TRAF4-203ENST00000394925 TAS2R60P59551 318 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 AKR1C1Q04828 323 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 TMEM256Q8N2U0 113 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 C16orf74Q96GX8 76 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 UHRF2Q96PU4 802 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 NOP10Q9NPE3 64 aaKnown RBP14.7□□□□□ -0.06
TRAF4-203ENST00000394925 HERC1Q15751 4861 aa14.7□□□□□ -0.06
TRAF4-203ENST00000394925 DUXBA0A1W2PPF3 345 aa14.69□□□□□ -0.06
TRAF4-203ENST00000394925 RPP30P78346 268 aaKnown RBP14.69□□□□□ -0.06
TRAF4-203ENST00000394925 OR8A1Q8NGG7 326 aa14.69□□□□□ -0.06
TRAF4-203ENST00000394925 CIB3Q96Q77 187 aaPredicted RBP14.69□□□□□ -0.06
TRAF4-203ENST00000394925 KRTAP1-5Q9BYS1 174 aa14.69□□□□□ -0.06
TRAF4-203ENST00000394925 RABL2AQ9UBK7 228 aaPredicted RBP14.69□□□□□ -0.06
TRAF4-203ENST00000394925 RABL2BQ9UNT1 228 aa14.69□□□□□ -0.06
TRAF4-203ENST00000394925 PIGBOS1A0A0B4J2F0 54 aa14.68□□□□□ -0.06
TRAF4-203ENST00000394925 H3BRN7 92 aa14.68□□□□□ -0.06
TRAF4-203ENST00000394925 KRTAP10-2P60368 255 aa14.68□□□□□ -0.06
TRAF4-203ENST00000394925 OR5I1Q13606 314 aa14.68□□□□□ -0.06
TRAF4-203ENST00000394925 SPCS2Q15005 226 aa14.68□□□□□ -0.06
TRAF4-203ENST00000394925 TMEM144Q7Z5S9 345 aa14.68□□□□□ -0.06
TRAF4-203ENST00000394925 TMED4Q7Z7H5 227 aa14.68□□□□□ -0.06
TRAF4-203ENST00000394925 SYNGR2O43760 224 aa14.67□□□□□ -0.06
TRAF4-203ENST00000394925 SMIM18P0DKX4 95 aa14.67□□□□□ -0.06
TRAF4-203ENST00000394925 SLC25A6P12236 298 aa14.67□□□□□ -0.06
TRAF4-203ENST00000394925 TTC32Q5I0X7 151 aa14.67□□□□□ -0.06
TRAF4-203ENST00000394925 SPANXN5Q5MJ07 72 aa14.67□□□□□ -0.06
TRAF4-203ENST00000394925 GNPNAT1Q96EK6 184 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-203ENST00000394925 SHANK2-AS3Q9BTD1 123 aa14.67□□□□□ -0.06
TRAF4-203ENST00000394925 TRAV26-1A0A087WT03 109 aa14.66□□□□□ -0.06
TRAF4-203ENST00000394925 H3BP45 60 aa14.66□□□□□ -0.06
TRAF4-203ENST00000394925 RPL7P18124 248 aaKnown RBP14.66□□□□□ -0.06
TRAF4-203ENST00000394925 CXCL3P19876 107 aa14.66□□□□□ -0.06
TRAF4-203ENST00000394925 RAP2BP61225 183 aa14.66□□□□□ -0.06
TRAF4-203ENST00000394925 PSG3Q16557 428 aa14.66□□□□□ -0.06
TRAF4-203ENST00000394925 ACOT7LQ6ZUV0 252 aa14.66□□□□□ -0.06
TRAF4-203ENST00000394925 LRRC20Q8TCA0 184 aa14.66□□□□□ -0.06
TRAF4-203ENST00000394925 HIGD1AQ9Y241 93 aa14.66□□□□□ -0.06
TRAF4-203ENST00000394925 SMCO3A2RU48 225 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 IL5P05113 134 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 VAMP1P23763 118 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 DLK1P80370 383 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 TMEM128Q5BJH2 165 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 ZNF493Q6ZR52 646 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 CYP2G1PQ6ZSU1 146 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 LRTM2Q8N967 370 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 OR10J6PQ8NGY7 276 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 RNASE8Q8TDE3 154 aaKnown RBP14.65□□□□□ -0.06
TRAF4-203ENST00000394925 Q9H3A6 140 aa14.65□□□□□ -0.06
TRAF4-203ENST00000394925 RSL24D1Q9UHA3 163 aaKnown RBP14.65□□□□□ -0.06
TRAF4-203ENST00000394925 A0A0J9YY99 117 aa14.64□□□□□ -0.07
TRAF4-203ENST00000394925 HYPMO75409 117 aa14.64□□□□□ -0.07
TRAF4-203ENST00000394925 OR5G3P0C626 314 aa14.64□□□□□ -0.07
TRAF4-203ENST00000394925 CDKN1BP46527 198 aa14.64□□□□□ -0.07
TRAF4-203ENST00000394925 RXFP4Q8TDU9 374 aa14.64□□□□□ -0.07
TRAF4-203ENST00000394925 TMEM263Q8WUH6 116 aaKnown RBP14.64□□□□□ -0.07
TRAF4-203ENST00000394925 STRAPQ9Y3F4 350 aaKnown RBP14.64□□□□□ -0.07
TRAF4-203ENST00000394925 M6PRP20645 277 aa14.63□□□□□ -0.07
TRAF4-203ENST00000394925 ESRGQ1W209 222 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms