RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
SNRPA1-202ENST00000394082 RSG1Q9BU20 258 aa12.38□□□□□ -0.43
SNRPA1-202ENST00000394082 LYRM9A8MSI8 78 aa12.37□□□□□ -0.43
SNRPA1-202ENST00000394082 SYNGR2O43760 224 aa12.37□□□□□ -0.43
SNRPA1-202ENST00000394082 IAPPP10997 89 aa12.37□□□□□ -0.43
SNRPA1-202ENST00000394082 DAD1P61803 113 aa12.37□□□□□ -0.43
SNRPA1-202ENST00000394082 TOMM5Q8N4H5 51 aa12.37□□□□□ -0.43
SNRPA1-202ENST00000394082 TRIM63Q969Q1 353 aa12.37□□□□□ -0.43
SNRPA1-202ENST00000394082 TMEM88Q6PEY1 159 aa12.36□□□□□ -0.43
SNRPA1-202ENST00000394082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.36□□□□□ -0.43
SNRPA1-202ENST00000394082 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
SNRPA1-202ENST00000394082 TMEM208Q9BTX3 173 aa12.36□□□□□ -0.43
SNRPA1-202ENST00000394082 TMEM147Q9BVK8 224 aa12.36□□□□□ -0.43
SNRPA1-202ENST00000394082 SLC25A22Q9H936 323 aa12.36□□□□□ -0.43
SNRPA1-202ENST00000394082 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
SNRPA1-202ENST00000394082 MUC4Q99102 2169 aa12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 IGLV2-18A0A075B6J9 118 aa12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 CRXO43186 299 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 HTN3P15516 51 aa12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 CNN1P51911 297 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 C1orf134Q5TEV5 83 aa12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 GSG1LQ6UXU4 331 aa12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 TMEM144Q7Z5S9 345 aa12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 OR11H7Q8NGC8 314 aa12.35□□□□□ -0.43
SNRPA1-202ENST00000394082 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
SNRPA1-202ENST00000394082 SFT2D2O95562 160 aa12.34□□□□□ -0.43
SNRPA1-202ENST00000394082 INSP01308 110 aa12.34□□□□□ -0.43
SNRPA1-202ENST00000394082 ORM2P19652 201 aa12.34□□□□□ -0.43
SNRPA1-202ENST00000394082 VAMP1P23763 118 aa12.34□□□□□ -0.43
SNRPA1-202ENST00000394082 INPP1P49441 399 aa12.34□□□□□ -0.43
SNRPA1-202ENST00000394082 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
SNRPA1-202ENST00000394082 TRAV8-2A0A0B4J237 113 aa12.33□□□□□ -0.44
SNRPA1-202ENST00000394082 WRBO00258 174 aa12.33□□□□□ -0.44
SNRPA1-202ENST00000394082 PLP1P60201 277 aa12.33□□□□□ -0.44
SNRPA1-202ENST00000394082 UBE2MP61081 183 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-202ENST00000394082 TMEM182Q6ZP80 229 aaPredicted RBP12.33□□□□□ -0.44
SNRPA1-202ENST00000394082 S100A7AQ86SG5 101 aa12.33□□□□□ -0.44
SNRPA1-202ENST00000394082 STRAPQ9Y3F4 350 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-202ENST00000394082 H3BRN7 92 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 RPL7P18124 248 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 SELENOTP62341 195 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 ID3Q02535 119 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 AKR1C1Q04828 323 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 PPP1R1AQ13522 171 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 TRIQKQ629K1 86 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 ACOT7LQ6ZUV0 252 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 TMEM256Q8N2U0 113 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 SHANK2-AS3Q9BTD1 123 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 SLC25A39Q9BZJ4 359 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 SRRQ9GZT4 340 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 RNF24Q9Y225 148 aa12.32□□□□□ -0.44
SNRPA1-202ENST00000394082 GATA2P23769 480 aaPredicted RBP12.31□□□□□ -0.44
SNRPA1-202ENST00000394082 RAP2BP61225 183 aa12.31□□□□□ -0.44
SNRPA1-202ENST00000394082 SPINK13Q1W4C9 94 aa12.31□□□□□ -0.44
SNRPA1-202ENST00000394082 A0A087X0K7 114 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 PLAC8L1A1L4L8 177 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 ZNF705GA8MUZ8 300 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 FNDC10F2Z333 226 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 BOLA2-SMG1P6H3BVE0 249 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 M0R2Z0 102 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 IL5P05113 134 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 HOXB5P09067 269 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 CYP2G1PQ6ZSU1 146 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 HIGD1AQ9Y241 93 aa12.3□□□□□ -0.44
SNRPA1-202ENST00000394082 K7EPK0 472 aa12.29□□□□□ -0.44
SNRPA1-202ENST00000394082 HYPMO75409 117 aa12.29□□□□□ -0.44
SNRPA1-202ENST00000394082 TAS2R60P59551 318 aa12.29□□□□□ -0.44
SNRPA1-202ENST00000394082 ATG101Q9BSB4 218 aa12.29□□□□□ -0.44
SNRPA1-202ENST00000394082 CBY3A6NI87 242 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 ATP5G1P05496 136 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 CXCL3P19876 107 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 ATP5G3P48201 142 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 C4orf46Q504U0 113 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 BAP18Q8IXM2 172 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 RNF182Q8N6D2 247 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 ZNF738Q8NE65 137 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 OR8A1Q8NGG7 326 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 ZNRF2Q8NHG8 242 aa12.28□□□□□ -0.44
SNRPA1-202ENST00000394082 NBDYA0A0U1RRE5 68 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 H3BP45 60 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 LINC00869P0C866 280 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 DEFB130BP0DP73 79 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 DEFB130AP0DP74 79 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 CXCL2P19875 107 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 DLK1P80370 383 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 FGL1Q08830 312 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 BAK1Q16611 211 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 PXDC1Q5TGL8 231 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 IGFL4Q6B9Z1 124 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 ZNF493Q6ZR52 646 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 C16orf74Q96GX8 76 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 SMIM8Q96KF7 97 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 NPVFQ9HCQ7 196 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 HSPG2P98160 4391 aa12.27□□□□□ -0.45
SNRPA1-202ENST00000394082 ABCA13Q86UQ4 5058 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 C9orf170A2RU37 121 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 NAP1L6A6NFF2 107 aa12.26□□□□□ -0.45
SNRPA1-202ENST00000394082 CENPXA8MT69 81 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 329.7 ms