RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 PCNX3Q9H6A9 2034 aa6.96□□□□□ -1.3
GABRA1-202ENST00000393943 B9A039 149 aa6.96□□□□□ -1.3
GABRA1-202ENST00000393943 SMAGPQ0VAQ4 97 aa6.96□□□□□ -1.3
GABRA1-202ENST00000393943 CD300EQ496F6 205 aaPredicted RBP6.96□□□□□ -1.3
GABRA1-202ENST00000393943 NUP37Q8NFH4 326 aa6.96□□□□□ -1.3
GABRA1-202ENST00000393943 TFF1P04155 84 aa6.96□□□□□ -1.3
GABRA1-202ENST00000393943 ARMS2P0C7Q2 107 aa6.96□□□□□ -1.3
GABRA1-202ENST00000393943 LGALS3P17931 250 aaKnown RBP6.96□□□□□ -1.3
GABRA1-202ENST00000393943 C11orf53Q8IXP5 236 aa6.96□□□□□ -1.3
GABRA1-202ENST00000393943 DLX4Q92988 240 aaPredicted RBP6.96□□□□□ -1.3
GABRA1-202ENST00000393943 DPM3Q9P2X0 92 aa6.96□□□□□ -1.3
GABRA1-202ENST00000393943 SNCGO76070 127 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 IGKV1-16P04430 117 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 IFI27P40305 119 aaPredicted RBP6.95□□□□□ -1.3
GABRA1-202ENST00000393943 HIGD1BQ9P298 99 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 K7EM74 188 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 FAM106CPP0CH98 169 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 CKS1BP61024 79 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 MAJINQ3KP22 176 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 ADAMTSL5Q6ZMM2 481 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 FBXL15Q9H469 300 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 PHLDA3Q9Y5J5 127 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 AHCTF1Q8WYP5 2266 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 A0A1B0GXF2 115 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 F5H697 171 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 NBR2O15453 112 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 MGPP08493 103 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 TM4SF20Q53R12 229 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 FAM201AQ5SY85 155 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 Q6ZR03 302 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 NDUFB8O95169 186 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 CCL3L1P16619 93 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 PI4KAP42356 2102 aa6.95□□□□□ -1.3
GABRA1-202ENST00000393943 TRBV19A0A075B6N1 114 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 LOC105371242A0A075B767 164 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 FAM167A-AS1Q96KT0 104 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 A0A1W2PPI3 338 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 A8MWV9 139 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 H7C1H1 209 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 SH2D1AO60880 128 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 MYOD1P15172 320 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 SYT8Q8NBV8 401 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 MBD6Q96DN6 1003 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 CHTOPQ9Y3Y2 248 aaKnown RBP6.94□□□□□ -1.3
GABRA1-202ENST00000393943 MBD3L4A6NDZ8 208 aaPredicted RBP6.94□□□□□ -1.3
GABRA1-202ENST00000393943 MBD3L3A6NE82 208 aaPredicted RBP6.94□□□□□ -1.3
GABRA1-202ENST00000393943 MBD3L5A6NJ08 208 aaPredicted RBP6.94□□□□□ -1.3
GABRA1-202ENST00000393943 ID1P41134 155 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 ZNF134P52741 427 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 SRSF6Q13247 344 aaKnown RBP6.94□□□□□ -1.3
GABRA1-202ENST00000393943 TEX36Q5VZQ5 186 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 TEX29Q8N6K0 151 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 MBD3L2Q8NHZ7 208 aaPredicted RBP6.94□□□□□ -1.3
GABRA1-202ENST00000393943 FAM168AQ92567 244 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 C16orf92Q96LL3 132 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 VGLL1Q99990 258 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 SIGLEC9Q9Y336 463 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 TNRC6AQ8NDV7 1962 aaKnown RBP6.94□□□□□ -1.3
GABRA1-202ENST00000393943 EEF1AKMT3Q96AZ1 226 aa6.94□□□□□ -1.3
GABRA1-202ENST00000393943 IGHV1-8P0DP01 117 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 ZNF138P52744 262 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 C10orf55Q5SWW7 151 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 TMEM200BQ69YZ2 307 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 ZNF474Q6S9Z5 364 aaPredicted RBP6.93□□□□□ -1.3
GABRA1-202ENST00000393943 MRAP2Q96G30 205 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 ATP6V0BQ99437 205 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 ASIPP42127 132 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 ZC2HC1BQ5TFG8 222 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 YLPM1P49750 1951 aaKnown RBP6.93□□□□□ -1.3
GABRA1-202ENST00000393943 TRBV20-1A0A075B6N2 111 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 OOSP1A8MZH6 123 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 IGLV2-8P01709 118 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 MLANAQ16655 118 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 SPANXDQ9BXN6 97 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 GTSF1LQ9H1H1 148 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 SIGLEC8Q9NYZ4 499 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 ZNF256Q9Y2P7 627 aaPredicted RBP6.93□□□□□ -1.3
GABRA1-202ENST00000393943 DNAJC13O75165 2243 aa6.93□□□□□ -1.3
GABRA1-202ENST00000393943 CDX4O14627 284 aaPredicted RBP6.92□□□□□ -1.3
GABRA1-202ENST00000393943 APOBEC3AP31941 199 aaPredicted RBP6.92□□□□□ -1.3
GABRA1-202ENST00000393943 Q8N8P6 123 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 FDCSPQ8NFU4 85 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 IGLV3-9A0A075B6K5 115 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 G3V4G9 280 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 FAM53AQ6NSI3 398 aaPredicted RBP6.92□□□□□ -1.3
GABRA1-202ENST00000393943 AMN1Q8IY45 258 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 K7EMI3 77 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 WT1-ASQ06250 92 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 DIDO1Q9BTC0 2240 aaKnown RBP6.92□□□□□ -1.3
GABRA1-202ENST00000393943 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 PRSS22Q9GZN4 317 aa6.92□□□□□ -1.3
GABRA1-202ENST00000393943 TRAV8-1A0A0A6YYK1 113 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 H3BRN7 92 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 TMEM178BH3BS89 294 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 NKX2-8O15522 239 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 ZFAND6Q6FIF0 208 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 CEND1Q8N111 149 aa6.91□□□□□ -1.3
GABRA1-202ENST00000393943 ANAPC13Q9BS18 74 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms