RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 PRR20BP86481 221 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 PRR20AP86496 221 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 OPCMLQ14982 345 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 PSMG4Q5JS54 123 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 SAMD13Q5VXD3 122 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 OR1L4Q8NGR5 311 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 UHRF2Q96PU4 802 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 RSG1Q9BU20 258 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 DNAJC4Q9NNZ3 241 aa14.05□□□□□ -0.16
PDLIM7-204ENST00000393546 KIR2DL5BA0A0G2JN68 375 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 KIR2DL5BA0A0G2JPC4 375 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 RPL7P18124 248 aaKnown RBP14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 B2MP61769 119 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 C10orf113Q5VZT2 155 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 LINC00305Q7Z4B0 112 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 KIR2DL5AQ8N109 375 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 ZNF709Q8N972 641 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 KIR2DL5BQ8NHK3 375 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 ATP5SQ99766 215 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 SLC39A9Q9NUM3 307 aa14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 HUWE1Q7Z6Z7 4374 aaKnown RBP14.04□□□□□ -0.16
PDLIM7-204ENST00000393546 UBE2CO00762 179 aa14.03□□□□□ -0.16
PDLIM7-204ENST00000393546 STHQ8IWL8 128 aa14.03□□□□□ -0.16
PDLIM7-204ENST00000393546 TMEM37Q8WXS4 190 aa14.03□□□□□ -0.16
PDLIM7-204ENST00000393546 PFDN5Q99471 154 aa14.03□□□□□ -0.16
PDLIM7-204ENST00000393546 NPCDR1Q9BY65 106 aa14.03□□□□□ -0.16
PDLIM7-204ENST00000393546 PXMP4Q9Y6I8 212 aa14.03□□□□□ -0.16
PDLIM7-204ENST00000393546 IFNA5P01569 189 aa14.02□□□□□ -0.17
PDLIM7-204ENST00000393546 ATF4P18848 351 aaPredicted RBP14.02□□□□□ -0.17
PDLIM7-204ENST00000393546 C16orf92Q96LL3 132 aa14.02□□□□□ -0.17
PDLIM7-204ENST00000393546 LINC00052Q96N35 136 aa14.02□□□□□ -0.17
PDLIM7-204ENST00000393546 SMIM3Q9BZL3 60 aa14.02□□□□□ -0.17
PDLIM7-204ENST00000393546 WDR61Q9GZS3 305 aaKnown RBP14.02□□□□□ -0.17
PDLIM7-204ENST00000393546 C17orf112F2Z3M2 114 aa14.01□□□□□ -0.17
PDLIM7-204ENST00000393546 ISLRO14498 428 aa14.01□□□□□ -0.17
PDLIM7-204ENST00000393546 PSMB3P49720 205 aa14.01□□□□□ -0.17
PDLIM7-204ENST00000393546 SCGB1C1Q8TD33 95 aa14.01□□□□□ -0.17
PDLIM7-204ENST00000393546 CSTL1Q9H114 145 aa14.01□□□□□ -0.17
PDLIM7-204ENST00000393546 KCNIP2Q9NS61 270 aa14.01□□□□□ -0.17
PDLIM7-204ENST00000393546 NBEAL2Q6ZNJ1 2754 aa14.01□□□□□ -0.17
PDLIM7-204ENST00000393546 KNCNA6PVL3 124 aa14□□□□□ -0.17
PDLIM7-204ENST00000393546 SOCS3O14543 225 aa14□□□□□ -0.17
PDLIM7-204ENST00000393546 Q5BKY6 102 aa14□□□□□ -0.17
PDLIM7-204ENST00000393546 ACTL10Q5JWF8 245 aa14□□□□□ -0.17
PDLIM7-204ENST00000393546 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14□□□□□ -0.17
PDLIM7-204ENST00000393546 GATAD1Q8WUU5 269 aa14□□□□□ -0.17
PDLIM7-204ENST00000393546 RETNQ9HD89 108 aa14□□□□□ -0.17
PDLIM7-204ENST00000393546 Q6ZWC4 215 aa13.99□□□□□ -0.17
PDLIM7-204ENST00000393546 BPIFA4PQ86YQ2 179 aa13.99□□□□□ -0.17
PDLIM7-204ENST00000393546 OR2T35Q8NGX2 323 aa13.99□□□□□ -0.17
PDLIM7-204ENST00000393546 C17orf77Q96MU5 243 aa13.99□□□□□ -0.17
PDLIM7-204ENST00000393546 WWC2-AS2Q96NR7 200 aa13.99□□□□□ -0.17
PDLIM7-204ENST00000393546 AGRNO00468 2067 aa13.99□□□□□ -0.17
PDLIM7-204ENST00000393546 INO80EQ8NBZ0 244 aaPredicted RBP13.98□□□□□ -0.17
PDLIM7-204ENST00000393546 LRRC20Q8TCA0 184 aa13.98□□□□□ -0.17
PDLIM7-204ENST00000393546 AQP10Q96PS8 301 aa13.98□□□□□ -0.17
PDLIM7-204ENST00000393546 A0A087X0K7 114 aa13.97□□□□□ -0.17
PDLIM7-204ENST00000393546 MORN5Q5VZ52 161 aa13.97□□□□□ -0.17
PDLIM7-204ENST00000393546 TRPT1Q86TN4 253 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-204ENST00000393546 PARD6GQ9BYG4 376 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-204ENST00000393546 WFDC1Q9HC57 220 aa13.97□□□□□ -0.17
PDLIM7-204ENST00000393546 RPRMQ9NS64 109 aa13.97□□□□□ -0.17
PDLIM7-204ENST00000393546 TP53TG1Q9Y2A0 90 aa13.97□□□□□ -0.17
PDLIM7-204ENST00000393546 FXYD6-FXYD2A0A087WZ82 144 aa13.96□□□□□ -0.17
PDLIM7-204ENST00000393546 MRPS12O15235 138 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-204ENST00000393546 SPRY2O43597 315 aa13.96□□□□□ -0.17
PDLIM7-204ENST00000393546 DEFB135Q30KP9 77 aa13.96□□□□□ -0.17
PDLIM7-204ENST00000393546 MORN3Q6PF18 240 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-204ENST00000393546 OVOL2Q9BRP0 275 aa13.96□□□□□ -0.17
PDLIM7-204ENST00000393546 TENM3Q9P273 2699 aa13.96□□□□□ -0.18
PDLIM7-204ENST00000393546 TRAV5A0A0B4J249 113 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 H3BMM0 161 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 CA1P00915 261 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 SPP1P10451 314 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 GCSAMLQ5JQS6 135 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 FAM78BQ5VT40 261 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 SPATA31B1PQ5VZV4 182 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 EBLN2Q6P2I7 272 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 FOXI2Q6ZQN5 318 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 RNF183Q96D59 192 aa13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 SAV1Q9H4B6 383 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-204ENST00000393546 HLA-DRB4P13762 266 aa13.94□□□□□ -0.18
PDLIM7-204ENST00000393546 CXCL2P19875 107 aa13.94□□□□□ -0.18
PDLIM7-204ENST00000393546 ZNF266Q14584 549 aa13.94□□□□□ -0.18
PDLIM7-204ENST00000393546 C20orf173Q96LM9 149 aa13.94□□□□□ -0.18
PDLIM7-204ENST00000393546 TNFSF18Q9UNG2 199 aa13.94□□□□□ -0.18
PDLIM7-204ENST00000393546 HLA-DRB4X5D2U9 266 aa13.94□□□□□ -0.18
PDLIM7-204ENST00000393546 STAB2Q8WWQ8 2551 aa13.94□□□□□ -0.18
PDLIM7-204ENST00000393546 TRAV8-2A0A0B4J237 113 aa13.93□□□□□ -0.18
PDLIM7-204ENST00000393546 DEFB1P60022 68 aa13.93□□□□□ -0.18
PDLIM7-204ENST00000393546 NUTF2P61970 127 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-204ENST00000393546 TMEM41BQ5BJD5 291 aa13.93□□□□□ -0.18
PDLIM7-204ENST00000393546 FFAR4Q5NUL3 377 aa13.93□□□□□ -0.18
PDLIM7-204ENST00000393546 IGFL4Q6B9Z1 124 aa13.93□□□□□ -0.18
PDLIM7-204ENST00000393546 LCN15Q6UWW0 184 aa13.93□□□□□ -0.18
PDLIM7-204ENST00000393546 HRH4Q9H3N8 390 aa13.93□□□□□ -0.18
PDLIM7-204ENST00000393546 SNRPCP09234 159 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-204ENST00000393546 GUK1Q16774 197 aa13.92□□□□□ -0.18
PDLIM7-204ENST00000393546 GDF5OSQ5U4N7 250 aa13.92□□□□□ -0.18
PDLIM7-204ENST00000393546 SLC50A1Q9BRV3 221 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms