RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 NPCDR1Q9BY65 106 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 U3KQK5 164 aa11.15□□□□□ -0.62
IGHV3-53-201ENST00000390627 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 LEMD1Q68G75 181 aa11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 LINC00305Q7Z4B0 112 aa11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 ZNF709Q8N972 641 aa11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 PFDN5Q99471 154 aa11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 WDR61Q9GZS3 305 aaKnown RBP11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 SLC39A9Q9NUM3 307 aa11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 PXMP4Q9Y6I8 212 aa11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 HUWE1Q7Z6Z7 4374 aaKnown RBP11.14□□□□□ -0.63
IGHV3-53-201ENST00000390627 KIR2DL5BA0A0G2JN68 375 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 KIR2DL5BA0A0G2JPC4 375 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 C17orf112F2Z3M2 114 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 IFNA5P01569 189 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 ID1P41134 155 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 ZNF124Q15973 351 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 PSMG4Q5JS54 123 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 PATE2Q6UY27 113 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 KIR2DL5AQ8N109 375 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 OR2T35Q8NGX2 323 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 KIR2DL5BQ8NHK3 375 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 SMIM3Q9BZL3 60 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 DNAJC4Q9NNZ3 241 aa11.13□□□□□ -0.63
IGHV3-53-201ENST00000390627 ATF4P18848 351 aaPredicted RBP11.12□□□□□ -0.63
IGHV3-53-201ENST00000390627 PSMB3P49720 205 aa11.12□□□□□ -0.63
IGHV3-53-201ENST00000390627 STHQ8IWL8 128 aa11.12□□□□□ -0.63
IGHV3-53-201ENST00000390627 SCGB1C1Q8TD33 95 aa11.12□□□□□ -0.63
IGHV3-53-201ENST00000390627 TMEM37Q8WXS4 190 aa11.12□□□□□ -0.63
IGHV3-53-201ENST00000390627 RCHY1Q96PM5 261 aa11.12□□□□□ -0.63
IGHV3-53-201ENST00000390627 AQP10Q96PS8 301 aa11.12□□□□□ -0.63
IGHV3-53-201ENST00000390627 RSG1Q9BU20 258 aa11.12□□□□□ -0.63
IGHV3-53-201ENST00000390627 UBE2CO00762 179 aa11.11□□□□□ -0.63
IGHV3-53-201ENST00000390627 ISLRO14498 428 aa11.11□□□□□ -0.63
IGHV3-53-201ENST00000390627 SOCS3O14543 225 aa11.11□□□□□ -0.63
IGHV3-53-201ENST00000390627 RPL35AP18077 110 aaKnown RBP11.11□□□□□ -0.63
IGHV3-53-201ENST00000390627 INO80EQ8NBZ0 244 aaPredicted RBP11.11□□□□□ -0.63
IGHV3-53-201ENST00000390627 GATAD1Q8WUU5 269 aa11.11□□□□□ -0.63
IGHV3-53-201ENST00000390627 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
IGHV3-53-201ENST00000390627 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
IGHV3-53-201ENST00000390627 FXYD6-FXYD2A0A087WZ82 144 aa11.1□□□□□ -0.63
IGHV3-53-201ENST00000390627 ZNF266Q14584 549 aa11.1□□□□□ -0.63
IGHV3-53-201ENST00000390627 Q5BKY6 102 aa11.1□□□□□ -0.63
IGHV3-53-201ENST00000390627 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
IGHV3-53-201ENST00000390627 BPIFA4PQ86YQ2 179 aa11.1□□□□□ -0.63
IGHV3-53-201ENST00000390627 LINC00052Q96N35 136 aa11.1□□□□□ -0.63
IGHV3-53-201ENST00000390627 TGP01266 2768 aa11.1□□□□□ -0.63
IGHV3-53-201ENST00000390627 A0A087X0K7 114 aa11.09□□□□□ -0.63
IGHV3-53-201ENST00000390627 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
IGHV3-53-201ENST00000390627 CSTL1Q9H114 145 aa11.09□□□□□ -0.63
IGHV3-53-201ENST00000390627 KNCNA6PVL3 124 aa11.08□□□□□ -0.64
IGHV3-53-201ENST00000390627 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
IGHV3-53-201ENST00000390627 CXCL2P19875 107 aa11.08□□□□□ -0.64
IGHV3-53-201ENST00000390627 MORN5Q5VZ52 161 aa11.08□□□□□ -0.64
IGHV3-53-201ENST00000390627 Q6ZWC4 215 aa11.08□□□□□ -0.64
IGHV3-53-201ENST00000390627 TRPT1Q86TN4 253 aaKnown RBP11.08□□□□□ -0.64
IGHV3-53-201ENST00000390627 WFDC1Q9HC57 220 aa11.08□□□□□ -0.64
IGHV3-53-201ENST00000390627 TNFSF18Q9UNG2 199 aa11.08□□□□□ -0.64
IGHV3-53-201ENST00000390627 SPP1P10451 314 aa11.07□□□□□ -0.64
IGHV3-53-201ENST00000390627 LCN15Q6UWW0 184 aa11.07□□□□□ -0.64
IGHV3-53-201ENST00000390627 FOXI2Q6ZQN5 318 aa11.07□□□□□ -0.64
IGHV3-53-201ENST00000390627 LRRC20Q8TCA0 184 aa11.07□□□□□ -0.64
IGHV3-53-201ENST00000390627 C17orf77Q96MU5 243 aa11.07□□□□□ -0.64
IGHV3-53-201ENST00000390627 RETNQ9HD89 108 aa11.07□□□□□ -0.64
IGHV3-53-201ENST00000390627 RPRMQ9NS64 109 aa11.07□□□□□ -0.64
IGHV3-53-201ENST00000390627 TP53TG1Q9Y2A0 90 aa11.07□□□□□ -0.64
IGHV3-53-201ENST00000390627 RNF222A6NCQ9 220 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 G3V3Q6 166 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 HLA-DRB4P13762 266 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 TMEM41BQ5BJD5 291 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 GCSAMLQ5JQS6 135 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 FFAR4Q5NUL3 377 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 FAM78BQ5VT40 261 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 SPATA31B1PQ5VZV4 182 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 MORN3Q6PF18 240 aaPredicted RBP11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 WWC2-AS2Q96NR7 200 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 SLC50A1Q9BRV3 221 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 MRPL32Q9BYC8 188 aaKnown RBP11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 SAV1Q9H4B6 383 aaPredicted RBP11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 TIMM9Q9Y5J7 89 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 HLA-DRB4X5D2U9 266 aa11.06□□□□□ -0.64
IGHV3-53-201ENST00000390627 TRAV5A0A0B4J249 113 aa11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 H3BMM0 161 aa11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 CA1P00915 261 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 IGLC2P0DOY2 106 aa11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 GUK1Q16774 197 aa11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 DEFB135Q30KP9 77 aa11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 EBLN2Q6P2I7 272 aa11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 HRH4Q9H3N8 390 aa11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
IGHV3-53-201ENST00000390627 TRAV8-2A0A0B4J237 113 aa11.04□□□□□ -0.64
IGHV3-53-201ENST00000390627 SPRY2O43597 315 aa11.04□□□□□ -0.64
IGHV3-53-201ENST00000390627 NUTF2P61970 127 aaKnown RBP11.04□□□□□ -0.64
IGHV3-53-201ENST00000390627 C20orf173Q96LM9 149 aa11.04□□□□□ -0.64
IGHV3-53-201ENST00000390627 OVOL2Q9BRP0 275 aa11.04□□□□□ -0.64
IGHV3-53-201ENST00000390627 BORCS7-ASMTA0A0B4J1R7 106 aa11.03□□□□□ -0.64
IGHV3-53-201ENST00000390627 SMLR1H3BR10 107 aa11.03□□□□□ -0.64
IGHV3-53-201ENST00000390627 ARPC5O15511 151 aa11.03□□□□□ -0.64
IGHV3-53-201ENST00000390627 ACOT6Q3I5F7 207 aaPredicted RBP11.03□□□□□ -0.64
IGHV3-53-201ENST00000390627 GDF5OSQ5U4N7 250 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms