RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 DCHS2Q6V1P9 2916 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 A6NDN8 102 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 HELTA6NFD8 242 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 TMEM178BH3BS89 294 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 ZZEF1O43149 2961 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 SCGB1A1P11684 91 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 CAMPP49913 170 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 GNG4P50150 75 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 RPEL1Q2QD12 228 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 SH2D6Q7Z4S9 175 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 Q8NA96 180 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 PRSS33Q8NF86 280 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 NUP37Q8NFH4 326 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 SGK494Q96LW2 274 aa9.43□□□□□ -0.9
RAPGEF3-201ENST00000389212 ARHGAP32A7KAX9 2087 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 CD69Q07108 199 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 C3orf36Q3SXR2 165 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 HCP5Q6MZN7 132 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 NPIPB3Q92617 1050 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 DYNLRB1Q9NP97 96 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 ZNF331Q9NQX6 463 aaPredicted RBP9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 ZNF257Q9Y2Q1 563 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 CGB1A6NKQ9 187 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 SPINK8P0C7L1 97 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 PRB4P10163 310 aaPredicted RBP9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 ATP5J2P56134 94 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 C2orf83Q53S99 150 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 IGFBPL1Q8WX77 278 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 LINC00574Q9H8X3 128 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 IL36BQ9NZH7 164 aa9.42□□□□□ -0.9
RAPGEF3-201ENST00000389212 NDUFB3O43676 98 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 FAM87AP0C7U9 286 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 YPEL3P61236 119 aaPredicted RBP9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 EBLN2Q6P2I7 272 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 TMEM70Q9BUB7 260 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 NDUFA4L2Q9NRX3 87 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 MOSP00540 346 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 CNTFRP26992 372 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 ERHP84090 104 aaKnown RBP9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 C5orf64Q2M2E5 130 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 KIR3DL3Q8N743 410 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 OR1L8Q8NGR8 309 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 TXNDC17Q9BRA2 123 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 PSG8Q9UQ74 426 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 COL6A6A6NMZ7 2263 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 FAM181BA6NEQ2 426 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 K7EP34 96 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 APCSP02743 223 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 UBE2L3P68036 154 aaKnown RBP9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 OR5AN1Q8NGI8 311 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 C11orf52Q96A22 123 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 JMJD8Q96S16 334 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 SSBP3Q9BWW4 388 aaPredicted RBP9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 F11RQ9Y624 299 aaKnown RBP9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 V9GYV3 84 aa9.41□□□□□ -0.9
RAPGEF3-201ENST00000389212 SVEP1Q4LDE5 3571 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 H3BTX0 84 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 AREGP15514 252 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 LOXP28300 417 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 PSG3Q16557 428 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 OSR1Q8TAX0 266 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 NEU4Q8WWR8 484 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 SSBP4Q9BWG4 385 aaPredicted RBP9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 E7EQL1 145 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 Q0VG73 95 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 KIR3DS1Q14943 382 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 VSTM2AQ8TAG5 236 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 RNASE6Q93091 150 aaKnown RBP9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 SLC25A33Q9BSK2 321 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 SLC25A2Q9BXI2 301 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 TMEM191AQ9H0A3 160 aa9.4□□□□□ -0.9
RAPGEF3-201ENST00000389212 ANKHD1Q8IWZ3 2542 aaKnown RBP9.4□□□□□ -0.91
RAPGEF3-201ENST00000389212 DLL1O00548 723 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 C8orf88P0DMB2 117 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 DPF1Q92782 380 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 TMEM167BQ9NRX6 74 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 ZNF355PQ9NSJ1 428 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 FOXA3P55318 350 aaPredicted RBP9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 SPATA12Q7Z6I5 190 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 OR4C13Q8NGP0 309 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 A0A1W2PPI3 338 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 COX7A2P2O60397 106 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 ORM2P19652 201 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 GNG5P63218 68 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 FOXC1Q12948 553 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 FA2HQ7L5A8 372 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 FAM168AQ92567 244 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 FAM167A-AS1Q96KT0 104 aa9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
RAPGEF3-201ENST00000389212 C9orf118A6NHY6 69 aa9.38□□□□□ -0.91
RAPGEF3-201ENST00000389212 C9JCJ5 164 aa9.38□□□□□ -0.91
RAPGEF3-201ENST00000389212 IGLV2-23P01705 113 aa9.38□□□□□ -0.91
RAPGEF3-201ENST00000389212 CSN3P07498 182 aa9.38□□□□□ -0.91
RAPGEF3-201ENST00000389212 HIST1H1AQ02539 215 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF3-201ENST00000389212 TIGITQ495A1 244 aa9.38□□□□□ -0.91
RAPGEF3-201ENST00000389212 PATE2Q6UY27 113 aa9.38□□□□□ -0.91
RAPGEF3-201ENST00000389212 LINC01560Q8TB33 94 aa9.38□□□□□ -0.91
RAPGEF3-201ENST00000389212 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms