RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 LINC01587Q99440 93 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 SLC25A15Q9Y619 301 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 RANBP2P49792 3224 aaKnown RBP4.07□□□□□ -1.76
LTN1-202ENST00000389194 ZFYVE26Q68DK2 2539 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 STAG3L2P0CL84 134 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 STAG3L3P0CL85 134 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 FMC1Q96HJ9 113 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 ELOVL5Q9NYP7 299 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 KIAA1549Q9HCM3 1950 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 TRBV9A0A0B4J1U6 114 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 WISP2O76076 250 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 IGKV1-39P01597 117 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 IGKV1D-39P04432 117 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 ASIPP42127 132 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 SNRPD3P62318 126 aaKnown RBP4.07□□□□□ -1.76
LTN1-202ENST00000389194 ZNF726P1Q15940 193 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 SAPCD1Q5SSQ6 148 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 TMEM14EPQ6UXP3 125 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 Q6ZR03 302 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 Q6ZVH6 145 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 STPG4Q8N801 248 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 IGHV1-8P0DP01 117 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 PAX9P55771 341 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 NRN1LQ496H8 165 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 RUSC1-AS1Q66K80 236 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 LYZL1Q6UWQ5 148 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 VMO1Q7Z5L0 202 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 AMN1Q8IY45 258 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 C1orf162Q8NEQ5 155 aaPredicted RBP4.07□□□□□ -1.76
LTN1-202ENST00000389194 IGHV1-3A0A0C4DH29 117 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 LY6G6EA0A0G2JKS1 128 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 TSPOP30536 169 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 PRSS57Q6UWY2 283 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 CACNG8Q8WXS5 425 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 U3KQA8 63 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 F2Z2F3 143 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 C3orf79P0CE67 100 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 TMEM95Q3KNT9 176 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 PSMG4Q5JS54 123 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 TMEM42Q69YG0 159 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 GAFA1Q96PS6 74 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 NPIPB6E9PJ23 425 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 TMEM178BH3BS89 294 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 MPZP25189 248 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 MPV17L2Q567V2 206 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 LYRM7Q5U5X0 104 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 TRAV2A0A0B4J234 112 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 H0YJW9 148 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 SNCGO76070 127 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 SCGB1A1P11684 91 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 ZNF134P52741 427 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 SSBP2P81877 361 aaPredicted RBP4.06□□□□□ -1.76
LTN1-202ENST00000389194 MDS2Q8NDY4 140 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 TNFRSF18Q9Y5U5 241 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 A0A087WWL8 130 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 FABP5P3A8MUU1 101 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 NPFFO15130 113 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 FCN3O75636 299 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 RAX2Q96IS3 184 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 CEP295Q9C0D2 2601 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 GNLYP22749 145 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 PEF1Q9UBV8 284 aaKnown RBP4.06□□□□□ -1.76
LTN1-202ENST00000389194 MRPS18CQ9Y3D5 142 aaKnown RBP4.06□□□□□ -1.76
LTN1-202ENST00000389194 UNC80Q8N2C7 3258 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 JMJD1CQ15652 2540 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 CDH23Q9H251 3354 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 TMEM213A2RRL7 107 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 C19orf67A6NJJ6 358 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 K7EM74 188 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 THBDP07204 575 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 MEF2CQ06413 473 aaPredicted RBP4.06□□□□□ -1.76
LTN1-202ENST00000389194 MAJINQ3KP22 176 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 OR10J3Q5JRS4 329 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 HAPLN4Q86UW8 402 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 OTORQ9NRC9 128 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 PLSCR4Q9NRQ2 329 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 ZNF257Q9Y2Q1 563 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 SOX21Q9Y651 276 aaPredicted RBP4.06□□□□□ -1.76
LTN1-202ENST00000389194 COL4A3Q01955 1670 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 TMEM238LA0A1B0GVL6 79 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 A6NJY4 79 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 PF4P02776 101 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 CFHR2P36980 270 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 IFI27P40305 119 aaPredicted RBP4.06□□□□□ -1.76
LTN1-202ENST00000389194 UCNP55089 124 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 C14orf178Q8N769 122 aaPredicted RBP4.06□□□□□ -1.76
LTN1-202ENST00000389194 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.06□□□□□ -1.76
LTN1-202ENST00000389194 C8orf49Q96NF6 230 aa4.06□□□□□ -1.76
LTN1-202ENST00000389194 A0A1W2PPI3 338 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 KNCNA6PVL3 124 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 G3V318 75 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.05□□□□□ -1.76
LTN1-202ENST00000389194 J3QW42 95 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 ZNF883P0CG24 379 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 RPS20P60866 119 aaKnown RBP4.05□□□□□ -1.76
LTN1-202ENST00000389194 NSUN5P1Q3KNT7 163 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 Q71RC1 249 aaPredicted RBP4.05□□□□□ -1.76
LTN1-202ENST00000389194 DPH3Q96FX2 82 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 OSTCQ9NRP0 149 aa4.05□□□□□ -1.76
LTN1-202ENST00000389194 PRUNE2Q8WUY3 3088 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms