RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CCL16O15467 120 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 CYB5BO43169 146 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 CEBPGP53567 150 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 IAH1Q2TAA2 248 aaPredicted RBP0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 GDPD1Q8N9F7 314 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 ST6GALNAC3Q8NDV1 305 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 OR52R1Q8NGF1 315 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 GPER1Q99527 375 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 BCL2L10Q9HD36 194 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 TVP23BQ9NYZ1 205 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 FBXO5Q9UKT4 447 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 NOSIPQ9Y314 301 aaKnown RBP0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 SLIT1O75093 1534 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 EML5Q05BV3 1969 aa0.41□□□□□ -2.34
RNU6-39P-201ENST00000384344 XIRP2A4UGR9 3374 aa0.4□□□□□ -2.34
RNU6-39P-201ENST00000384344 ZZEF1O43149 2961 aa0.4□□□□□ -2.34
RNU6-39P-201ENST00000384344 WDFY3Q8IZQ1 3526 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 hCG_1818297A0A087WSY0 165 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 TRBV6-4A0A1B0GX49 114 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 A8MT66 165 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 C1orf196B1AJZ1 125 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 DHFRP00374 187 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 EFNA4P52798 201 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 EIF5AP63241 154 aaKnown RBP0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 IMPG1Q17R60 797 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 LYRM7Q5U5X0 104 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 TRAPPC5Q8IUR0 188 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 PLPP5Q8NEB5 264 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 OR2T35Q8NGX2 323 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 CCDC42Q96M95 316 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 TRIM4Q9C037 500 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 C14orf105Q9NVL8 296 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 PEAK1Q9H792 1746 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 SMG1Q96Q15 3661 aaKnown RBP0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 PTPRMP28827 1452 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 MRC2Q9UBG0 1479 aa0.4□□□□□ -2.35
RNU6-39P-201ENST00000384344 ADGRG4Q8IZF6 3080 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 CSMD2Q7Z408 3487 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 KMT2AQ03164 3969 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 IGLV3-32A0A0A0MS00 114 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 FAM236DA0A1B0GTK5 79 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 TCRBV4S1A1TA0A5B7 111 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 hADV38S2A0JD32 116 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 C8GP07360 202 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 SMIM17P0DL12 118 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 FAM236CP0DP71 79 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 SRP14P37108 136 aaKnown RBP0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 PTRHD1Q6GMV3 140 aaKnown RBP0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 TP53RKQ96S44 253 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 LINC00467Q9BRT7 94 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 RNF122Q9H9V4 155 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 NIT2Q9NQR4 276 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 ORMDL1Q9P0S3 153 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 TNFSF18Q9UNG2 199 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 NEO1Q92859 1461 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 SPENQ96T58 3664 aaKnown RBP0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 PPRC1Q5VV67 1664 aaKnown RBP0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 TNRC6AQ8NDV7 1962 aaKnown RBP0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 ATMQ13315 3056 aa0.39□□□□□ -2.35
RNU6-39P-201ENST00000384344 KDM6AO15550 1401 aaPredicted RBP0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 CSPG4Q6UVK1 2322 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 CUBNO60494 3623 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 MED12Q93074 2177 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 RTL1A6NKG5 1358 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 ROBO3Q96MS0 1386 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 TRGV10A0A0A0MS01 117 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 IGHV1-58A0A0C4DH39 117 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 TLCD2A6NGC4 264 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 NUPR1O60356 82 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 RPP14O95059 124 aaKnown RBP0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 GADD45GO95257 159 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 CNIH1O95406 144 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 SERPINE1P05121 402 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 HIST1H3AP68431 136 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 H3F3AP84243 136 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 EDDM3AQ14507 147 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 C12orf74Q32Q52 190 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 Q6Q795 121 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 SLC30A7Q8NEW0 376 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 SLAMF6Q96DU3 332 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 TLNRD1Q9H1K6 362 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 UBAP1Q9NZ09 502 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 CNTRLQ7Z7A1 2325 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 VPS13CQ709C8 3753 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 TRIOO75962 3097 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 EHBP1L1Q8N3D4 1523 aa0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 BLMP54132 1417 aaPredicted RBP0.38□□□□□ -2.35
RNU6-39P-201ENST00000384344 TACC2O95359 2948 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 APC2O95996 2303 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 KPNA3O00505 521 aaPredicted RBP0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 PDE6DO43924 150 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 ZNF682O95780 498 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 IGLV3-1P01715 115 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 DYNLT1P63172 113 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 SPRNQ5BIV9 151 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 LELP1Q5T871 98 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 WFDC5Q8TCV5 224 aa0.37□□□□□ -2.35
RNU6-39P-201ENST00000384344 ZNF431Q8TF32 576 aaPredicted RBP0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms