RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CRHP06850 196 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 G0S2P27469 103 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 S100A5P33763 92 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 TMBIM6P55061 237 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 C3orf33Q6P1S2 294 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 OR5D16Q8NGK9 328 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 NEK7Q8TDX7 302 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 ZNF431Q8TF32 576 aaPredicted RBP1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 TNS3Q68CZ2 1445 aa1.65□□□□□ -2.15
RNU6-40P-201ENST00000384254 DLG5Q8TDM6 1919 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 TLCD2A6NGC4 264 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 MFSD11O43934 449 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 GNG10P50151 68 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 DSCR4P56555 118 aaPredicted RBP1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 ROMO1P60602 79 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 CDK6Q00534 326 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 GRINAQ7Z429 371 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 NUP35Q8NFH5 326 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 OBSCN-AS1Q96MR7 158 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 HOPXQ9BPY8 73 aaPredicted RBP1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 BOLA2Q9H3K6 86 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 LAMTOR3Q9UHA4 124 aa1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 HELZ2Q9BYK8 2649 aaKnown RBP1.64□□□□□ -2.15
RNU6-40P-201ENST00000384254 ROCK1Q13464 1354 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 TRAV10A0A0B4J240 114 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 M0R233 179 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 CCL16O15467 120 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 INSL3P51460 131 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 FAM24BQ8N5W8 94 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 GPX7Q96SL4 187 aaPredicted RBP1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 MAP1LC3BQ9GZQ8 125 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 CACYBPQ9HB71 228 aaKnown RBP1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 TAS2R7Q9NYW3 318 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 ORMDL1Q9P0S3 153 aa1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 CHCHD2Q9Y6H1 151 aaPredicted RBP1.63□□□□□ -2.15
RNU6-40P-201ENST00000384254 ARHGEF11O15085 1522 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 E7EUB6 86 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 ERC2-IT1O76042 136 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 DNAL4O96015 105 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 IDO1P14902 403 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 SERPINB1P30740 379 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 RAB5CP51148 216 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 PATE1Q8WXA2 126 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 CHCHD1Q96BP2 118 aaKnown RBP1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 MUCL1Q96DR8 90 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 C22orf24Q9Y442 160 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 MYH2Q9UKX2 1941 aa1.62□□□□□ -2.15
RNU6-40P-201ENST00000384254 TNRC6AQ8NDV7 1962 aaKnown RBP1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 NUP98P52948 1817 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 TRAV5A0A0B4J249 113 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 PPP5D1E7EU14 171 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 PFDN1O60925 122 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 CD2P06729 351 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 CXCL1P09341 107 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 ZNF25P17030 456 aaPredicted RBP1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 ARPP19P56211 112 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 TEN1Q86WV5 123 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 DYDC1Q8WWB3 177 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 MED11Q9P086 117 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 TMEM14CQ9P0S9 112 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 OR52A1Q9UKL2 312 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 V9GYQ6 96 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 COL6A6A6NMZ7 2263 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 CEP164Q9UPV0 1460 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 TECTAO75443 2155 aa1.61□□□□□ -2.15
RNU6-40P-201ENST00000384254 YTHDC2Q9H6S0 1430 aaKnown RBP1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 TRBV6-4A0A1B0GX49 114 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 OR2T8A6NH00 312 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 GPR31O00270 319 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 HIST1H2BKO60814 126 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 PIAS1O75925 651 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 HIST1H2BJP06899 126 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 CRYBA4P53673 196 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 KLRD1Q13241 179 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 C1orf140Q5VVS0 124 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 STX12Q86Y82 276 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 POP5Q969H6 163 aaKnown RBP1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 RAB37Q96AX2 223 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 PLEKHB2Q96CS7 222 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 RTL8AQ9BWD3 113 aa1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 MYO5AQ9Y4I1 1855 aaKnown RBP1.6□□□□□ -2.15
RNU6-40P-201ENST00000384254 NUP210LQ5VU65 1888 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 CAMSAP2Q08AD1 1489 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 CACNA1BQ00975 2339 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 RER1O15258 196 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 CCL25O15444 150 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 GLRXP35754 106 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 VBP1P61758 197 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 RTL8BQ17RB0 113 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 PATE2Q6UY27 113 aa1.59□□□□□ -2.15
RNU6-40P-201ENST00000384254 NCAPD3P42695 1498 aa1.58□□□□□ -2.16
RNU6-40P-201ENST00000384254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.58□□□□□ -2.16
RNU6-40P-201ENST00000384254 IGHV1-58A0A0C4DH39 117 aa1.58□□□□□ -2.16
RNU6-40P-201ENST00000384254 ODAMA1E959 279 aa1.58□□□□□ -2.16
RNU6-40P-201ENST00000384254 F8W1H4 67 aa1.58□□□□□ -2.16
RNU6-40P-201ENST00000384254 LYRM1O43325 122 aa1.58□□□□□ -2.16
RNU6-40P-201ENST00000384254 CST7O76096 145 aa1.58□□□□□ -2.16
RNU6-40P-201ENST00000384254 CSN2P05814 226 aa1.58□□□□□ -2.16
RNU6-40P-201ENST00000384254 MSMO1Q15800 293 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms